| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3490 |
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| Symbol | |
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| ID | 6245046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 419800 |
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| End bp | 421311 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642595273 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001859685 |
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| Protein GI | 186472343 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.350691 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGAA CGATACTGAC GGCCCTCGCG GCCGCGCTCT TCGCGAGCGG CTGCACGCTC
GCGCCGACTT ATGAACGGCC GGCCGCGCCT GTCGCGGCGA CCTATCCGCA AGGCGACGTC
TACGATAACC AGCCTGCAAA AGGCGCGGCC ACGCGCACGG CCAACGATCA CGCCGCCATT
GACATCGGCT GGCGCGAATT CTTCATCGAT CCGCGCCTGC AACGTCTGAT CGAACTCGCG
TTGCAGAACA ACCGCGACTT GCGCGTGTCG GCGCTCAAGG TCGAGGAAGC GCGTGCGCAA
TACCGCATCC AGCGCGCCGA CCTGATGCCG TCGGTTTCCG TCGACGGCAC GGGCACGCGC
AGCCGCACGC CGAAGGATCT GTCGTATGTC GGACGGGCGA CGGTCGGCAG CGACTATCAG
GTGGCGGCGA GCGCGTCATG GGAACTCGAC TTCTTCGGCA AGGTGCGCAG CCTCACCGAG
CAGTCCATGC AGACGTACTT CTCGACAGCG CAGGCGCGCA AGGCGGAAGA GATCCTGCTG
GTGTCGCAGG TCGCCGATCA ATATCTGACG CTCGTCGCCT ACGGCGAAAT GCTGGCAAGC
ACGAAGAACA CCTACGATAC GGCGCGCCGC TCGTATGAGC TGACGAAGCT CCAGTACGAC
ATGGGCACCG GCTCCGAACT CGATCTGCGC GAAGCGGCGG GCACGATGCA GCAGGCGCAG
GCGAACTACG AAAGCCAGCA GCGTTCGCGC GCGCAGGCCG AGAACGCGCT CGTGCTGCTG
GTCGGCGCGC CGTTGGCCGC CGACTTGCCG CAAGGCTTGC CGCTCGCGAG CCAGCAACTG
CTCGCGGACA TTCCGGCGGG CTTGCCGTCC GACCTGCTCA CGCGCCGTCC CGACATCATG
GAAGCCGAGG CGACGCTGAT CGGCGCGAAC GCGAATATCG GTGCGGCGCG TGCGGCGTTC
TTCCCGAGCA TCTCGCTGAC GGGCGACTTC GGTACGGCAA GCGCGAGTCT CGGCACGCTG
TTCAAACCGG GCCAGCTCGC ATGGAGTTTC GGCCCGACCA TTTCCGTGCC GATCTTCAAG
GGCGGCGAGA ACCGCGCGAA TCTCGATCTC GCGAAGCTCG AAAAGAACGT TGCCGTCGCA
CAGTACGAGA AAGCGATCCA GACGGCGTTC CGCGAAGTCT CCGACGGTCT CGCCGCGCGC
GGCACGTACG ACCGGCAGAT CAAGGCGCTG CAGGAGAACG TCGAGTCGCA GCAGCGTCGC
TATGATCTGT CGGATGTGCG CTATCGCAAT GGGGCCGACA GCTATCTGAA CGTGCTGACC
GCGCAGACCG ATCTGTATTC GGCGCAACAG TCGCTGATTA CGGCATCGTT GAACCGCCTG
ACTAATCTTG TCGATCTGTA TCAGTACCTG GGCGGCGGCT GGATCGAGCA TTCGGGCGAC
ACGCCCCGTG CCGCCGACGC GCCATACGCA CAGCAGACGG AACCGACCAC ACACGTCGCT
TCCCAGCCGT AA
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| Protein sequence | MNRTILTALA AALFASGCTL APTYERPAAP VAATYPQGDV YDNQPAKGAA TRTANDHAAI
DIGWREFFID PRLQRLIELA LQNNRDLRVS ALKVEEARAQ YRIQRADLMP SVSVDGTGTR
SRTPKDLSYV GRATVGSDYQ VAASASWELD FFGKVRSLTE QSMQTYFSTA QARKAEEILL
VSQVADQYLT LVAYGEMLAS TKNTYDTARR SYELTKLQYD MGTGSELDLR EAAGTMQQAQ
ANYESQQRSR AQAENALVLL VGAPLAADLP QGLPLASQQL LADIPAGLPS DLLTRRPDIM
EAEATLIGAN ANIGAARAAF FPSISLTGDF GTASASLGTL FKPGQLAWSF GPTISVPIFK
GGENRANLDL AKLEKNVAVA QYEKAIQTAF REVSDGLAAR GTYDRQIKAL QENVESQQRR
YDLSDVRYRN GADSYLNVLT AQTDLYSAQQ SLITASLNRL TNLVDLYQYL GGGWIEHSGD
TPRAADAPYA QQTEPTTHVA SQP
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