| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3486 |
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| Symbol | |
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| ID | 6245042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 410682 |
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| End bp | 412184 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642595269 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001859681 |
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| Protein GI | 186472339 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0233233 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGACA AAGCTACGCG CACGACGCGG CGTGTGCAAC GATCGATCGT GGCTGCCGCC
ATTGCAACGC TGTGCGCAGG CTGCGCGGTC GGCCCCGACT ACAAGCGGCC CGATGTCGTC
GTGCCCGCCG CCTTCAAGGA AGCCAACAGT TCCGATGCGG GCGACGTGTG GCAGCAGGCG
AAGCCCGATC CCGCCGCGTC ACTCGATAGC CGCTGGTGGA CCGTGTTCGG CGACGGGACG
CTCGACGATC TGTGCGAGCG CGCGCTGAAG GCGAACCAGA CCCTCGCGCA ATACGAAGCC
GCGTATCGCT CGGCGCGCGC CCAGGTCGCG TCGTCGCGCG CGAGTCTGTT TCCCACGGTG
TCGTTCGCCG GTTCGGGTAC GCGCTCGCGT ACGGGTACCG GCAGCAACAC GACACCGATT
TCATCAGGCA GCAGCACTAG CAGCTACGCG TCGAAGAGCG TGTCGGCGGA ACTGGAGGCG
AGCTGGGAGC CGGACCTGTG GGGCAGCGTG CGGCGCTCCG TCGAAGTGAG CGAGGCTAGC
GCGCAGGCAT CGGATGCGCA ACTGGCGGGC GAGCGCCTGA GCGTGCTCGC GACGCTGGCC
GTCGACTACT TCACCGTGCG GGCCGCCGAC GCCGATCTCG CGATTCTCGA AGAGGAACGC
CGCATCGATG CGGAACTGCT CGCGCTGACG GAAGCGAAGT ACAAGCAAGG CGTTTCCTCG
TATGACGATG TGCGCACGGC CCACAACACA TTGCAGGCGA TCGACGAAAG TATCGCGAGC
GCGCAACTCA CGCGCCGTCA GTACGAGCAT GCGATTGCCG TGCTGCTCGG CGAGCCGCCC
GCGGCGTTTT CGCTGCCGGT TCAGGCGGAC TATCGGTTCG ACTTGCCGGC GCTGCCCGTC
GCGTTGCCGT CCACATTGCT GCAGCGGCGG CCGGACGTCG TGCAGGCCGA GCGCACGGTC
GCGCAATACA ACGCGAAAAT CGGCGTGGCG AAGGCGGGCT ATTTCCCGAC CATCACGCTA
ACGGCCGACG GCGGCTGGAG CGGCACGTCG TTCGCGCATC TAATCTCGCT GCCCACGCGC
TTCTGGTCGC TCGGACTCGA CGTTGCGCAG ACGGTGTTCG ATGCGGGCGC GACGAGCGCC
TCGGTGCGTG CCGCGCGCGC CAACTACGAT CAGGAAGTGG CCGCGTACCG GCAGACCGTG
CTGAGCGCGT TCCAGGACGT TGAAGATTAT CTGAGCGCAG TGCAGATCGC GTCGCGCCAG
GCGGCAGCGT CGAACGAGGT CGCGCGGCGC AGCGGCGAAC TGGCCGCCAG CCAGCAACGC
AACTTCGCGG CAGGCACGGC GAGCCGCATC GACATGCTCG ACACGCAACT CACGCAAGTG
GAGGACCGCA AGATCGCCCT CGACTACAGC AGCACGACGT TGCAGAACGC TGTGCTGCTA
GTGAAAGCGC TGGGGGGCGG GTGGGACAGT CAACTGAAGA CGGCGGATTC TTCCGGGAGG
TGA
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| Protein sequence | MMDKATRTTR RVQRSIVAAA IATLCAGCAV GPDYKRPDVV VPAAFKEANS SDAGDVWQQA
KPDPAASLDS RWWTVFGDGT LDDLCERALK ANQTLAQYEA AYRSARAQVA SSRASLFPTV
SFAGSGTRSR TGTGSNTTPI SSGSSTSSYA SKSVSAELEA SWEPDLWGSV RRSVEVSEAS
AQASDAQLAG ERLSVLATLA VDYFTVRAAD ADLAILEEER RIDAELLALT EAKYKQGVSS
YDDVRTAHNT LQAIDESIAS AQLTRRQYEH AIAVLLGEPP AAFSLPVQAD YRFDLPALPV
ALPSTLLQRR PDVVQAERTV AQYNAKIGVA KAGYFPTITL TADGGWSGTS FAHLISLPTR
FWSLGLDVAQ TVFDAGATSA SVRAARANYD QEVAAYRQTV LSAFQDVEDY LSAVQIASRQ
AAASNEVARR SGELAASQQR NFAAGTASRI DMLDTQLTQV EDRKIALDYS STTLQNAVLL
VKALGGGWDS QLKTADSSGR
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