| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3470 |
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| Symbol | |
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| ID | 6245030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 394745 |
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| End bp | 395497 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642595257 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001859669 |
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| Protein GI | 186472327 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0741311 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGAA TCGATCTGGA GGGGCGTGTC GTCGTCATTA CGGGCGGGGC GCGAGGTATC
GGCTATGCGG TTGCGCAGCG CGCGCTGCGT TCAGGCGCGG CCGTCGCGCT GTGGGACCTG
GACGCTGAGC GGCTCGCCCG CAGCGAGCGC GAACTCGCCG AACTCGGCAA GGTCTGCGCC
GTCACCGTCG ATCAAACCAA AGAGGCGCAG ATCGAGGCCG CCGTCGGCAA GACGCTCGCC
GCTTTCGGCG CGATCGACGT GTTGATCAAC TGTGCGGGCA TCACAGGCGG CAACGGGACG
ACGTGGGAAC TCGAGCCGGA TGTGTGGCGG CAGGTGATCG ACGTGAATCT GATCGGCCCG
TATCTCGTGT GCCGTGCGGT CGTGCCGCAG ATGCTGAAGC AGGGTTACGG ACGCATCGTC
AATATCGCGT CGGTGGCGGG CAAGGAAGGC AATCCGAACG CGTCCCACTA CAGCGCGTCG
AAGGCGGGGC TGATCGGCCT GACCAAATCG CTCGGCAAGG AACTCGCGAC GAAGAATATC
CTCGTCAACG CGGTTACGCC GGCTGCCGCA AAAACGGAAA TCTTCGATTC GATGAAGCAG
GAGCACATCG ATTACATGCT TTCCAAAATA CCGATGAACC GCTTCCTGCT GCCCGACGAA
GCCGCGTCAC TGATCCTGTG GCTCGGGTCG GAAGACTGCG CGTTCAGCAC GGGTTCGGTA
TTCGATCTAT CGGGCGGACG CGCGACTTAC TAG
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| Protein sequence | MNRIDLEGRV VVITGGARGI GYAVAQRALR SGAAVALWDL DAERLARSER ELAELGKVCA
VTVDQTKEAQ IEAAVGKTLA AFGAIDVLIN CAGITGGNGT TWELEPDVWR QVIDVNLIGP
YLVCRAVVPQ MLKQGYGRIV NIASVAGKEG NPNASHYSAS KAGLIGLTKS LGKELATKNI
LVNAVTPAAA KTEIFDSMKQ EHIDYMLSKI PMNRFLLPDE AASLILWLGS EDCAFSTGSV
FDLSGGRATY
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