| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3468 |
|---|
| Symbol | |
|---|
| ID | 6245028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 392121 |
|---|
| End bp | 393299 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642595255 |
|---|
| Product | mandelate racemase/muconate lactonizing protein |
|---|
| Protein accession | YP_001859667 |
|---|
| Protein GI | 186472325 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.128866 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATGC CCTCTATCCG GCACGTGCGT GCCTTCGTCG TCCGCGGCGG CGGCGCGGAC
TACCACGATC AGGCCGACGG ACACTGGATC GATGATCACA TCTCGACGCC GATGGCGCGT
TACCCCGAAT ACCGGCAAAG CCGGCAGTCG TTCGGCATCA ACGTGCTGGG TACGCTGGTC
GTCGAAATCG AGGCGAGCGA CGGCACGGTC GGCTTCGCGG TGACCACGGG CGGCGAGATC
GGCGCGTTCA TCGTCGAGAA GCATCTGGCG CGCTTCCTCG AAGGGCAGCT CGTGACGGAC
ATCGAGAAGA TGTGGGATCA GATGTACTTC TCGACGCTCT ATTACGGGCG CAAGGGCGTC
GTGCTCAACA CGATATCGGG CGTCGATCTT GCGTTGTGGG ATCTACTCGC GAAAGTGCGC
AAGGAGCCCG TGTATCAACT ATTGGGCGGT CCGGTGCGCG ACGAACTGCA GTTCTACGCG
ACGGGTGCGC GGCCCGATCT GGCGAAGGAG ATGGGTTTTA TCGGCGGCAA GCTGCCGCTG
CAGCACAGTC CTGCCGAAGG CGAAGAGGGC TTGCGCAAGA ACATCGACAA ACTGGCTGAG
ATGCGCGGAC GAGTCGGCGG CGATTTCTGG CTGATGTACG ACTGCTGGAT GAGTCTCGAC
GTGACGTATG CGACGAAGCT TGCGAAGGCG GCGCACGAGC ACGGGCTGAA GTGGATCGAA
GAAGCCTTGC CGCCCGACGA TTACTGGGGT TACGCCGAAC TGCGCCGCAA CGTGCCGCGC
GGCATGATGG TGTCGACGGG CGAGCACGAG GCGACGCGCT GGGGTTTCCG GATGCTGCTC
GAGATGGGCT GCTGCGATCT GATCCAGCCG GACGTGGGCT GGTGCGGAGG CATCACGGAA
CTGGTCAAGA TTTCCGCGCT CGCCGATGCG CATAACGTGC TGGTCGTGCC GCACGGGTCG
TCGGTGTACA GCTATCACTT CGTTGTCACG CGCCACAACT CGCCGTTCGC CGAGTTCCTG
ATGATGGCGC CGAAGGCCGA CCAGGTTGTG CCGATGTTTA CGCCGCTGCT GCTCGACGAG
CCCGTGCCCG TTAACGGCCG CATGAGGGTG CCCGACACGC CGGGTTTCGG CGTGCGGCTG
AATCCCGAGT GCAAGCTCGA GCGCCCTTAT CAGCATTGA
|
|---|
| Protein sequence | MAMPSIRHVR AFVVRGGGAD YHDQADGHWI DDHISTPMAR YPEYRQSRQS FGINVLGTLV
VEIEASDGTV GFAVTTGGEI GAFIVEKHLA RFLEGQLVTD IEKMWDQMYF STLYYGRKGV
VLNTISGVDL ALWDLLAKVR KEPVYQLLGG PVRDELQFYA TGARPDLAKE MGFIGGKLPL
QHSPAEGEEG LRKNIDKLAE MRGRVGGDFW LMYDCWMSLD VTYATKLAKA AHEHGLKWIE
EALPPDDYWG YAELRRNVPR GMMVSTGEHE ATRWGFRMLL EMGCCDLIQP DVGWCGGITE
LVKISALADA HNVLVVPHGS SVYSYHFVVT RHNSPFAEFL MMAPKADQVV PMFTPLLLDE
PVPVNGRMRV PDTPGFGVRL NPECKLERPY QH
|
|---|
| |