| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3460 |
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| Symbol | |
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| ID | 6245020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 383916 |
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| End bp | 384926 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642595247 |
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| Product | rhamnose ABC transporter, periplasmic rhamnose-binding protein |
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| Protein accession | YP_001859659 |
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| Protein GI | 186472317 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02637] rhamnose ABC transporter, rhamnose-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.447839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.998408 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAC CACTGCGTCA CGCAGGAGCG ATGCTGCTTT GCGCGGCCAT GCTCGGCGCC
AGCGTCGCGG CGGCGGCTGC CGCCGGCATC AAGCCCGACC TGAAGATCGC GTTCGTGCCG
AAGCAGATCA ACAACCCGTA CGAAGTGATC GCCGACGACG GCGGGATGGC GGCGATCAAG
GAGTTCAAGG GGCAGGGCAA GGTGGTGGGG CCCTCGGACG CGGGCGCGTC GTCGCAGGTG
TCGTACATCA ACACGCTGAC GACGCAGCGC CAGGATGCAA TCGTGATCGC AGCCAACGAC
GCGAACGCGC TCGTGCCATA TTTGAAGAAG GCGATGTCAC AAGGCATCAA GGTCGTGACG
TTCGACTCGG ATACGGCGCA CGATGGCCGC CAACTGTTCG TTAATCAGGC GAACGCGGAG
AGCATCGGAC GCGGACAGAT CCAGCTGGTG TCGAAGCTGA TGGGCGGCGA GGGCGAGTTC
GCGATCCTGT CCGCGACGCC GAACGCGACC AACCAGAATA CGTGGATCAA GTGGATGCAG
GAGGAATTGA AGAAGCCGGA GTATTCGAAG CTAAAACTCG TGAAAATCGC GTACGGCAAC
GATGACGACC AGAAGTCGTT CGTCGAGACC CAAGGTCTGT TGCAGGCATA CCCGAATCTG
AAGGCGATCG TCGCGCCGAC GTCGGTCGGG ATCGCGGCGG CGGCGCGCTA TATCTCGACG
TCGTCGAGCA AGGGAAAGGT TGCCGTGACG GGCCTCGGTA CGCCGAACCA GATGCGTGCG
TTCGTCAAGA ATGGCACCGT GAAGGCGTTC CAGTTGTGGG ATCCGGGCCA GTTGGGCTAT
CTCGCGGCCT ACGCGGCGGC GAGCCTGGCG TCGGGTGCGA TCACGGGCAA GGAAGGCGAA
TCGTTCGATG CAGGCAAGCT CGGCAAGCGC ACGATCGGCG CGCAAGGCGA GATCATCCTC
GGACCGCCCA CGACGTTCGA CGCAAGCAAT ATCGACAACT TCAATTTCTG A
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| Protein sequence | MNKPLRHAGA MLLCAAMLGA SVAAAAAAGI KPDLKIAFVP KQINNPYEVI ADDGGMAAIK
EFKGQGKVVG PSDAGASSQV SYINTLTTQR QDAIVIAAND ANALVPYLKK AMSQGIKVVT
FDSDTAHDGR QLFVNQANAE SIGRGQIQLV SKLMGGEGEF AILSATPNAT NQNTWIKWMQ
EELKKPEYSK LKLVKIAYGN DDDQKSFVET QGLLQAYPNL KAIVAPTSVG IAAAARYIST
SSSKGKVAVT GLGTPNQMRA FVKNGTVKAF QLWDPGQLGY LAAYAAASLA SGAITGKEGE
SFDAGKLGKR TIGAQGEIIL GPPTTFDASN IDNFNF
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