| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3449 |
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| Symbol | |
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| ID | 6245009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 370907 |
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| End bp | 371812 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642595236 |
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| Product | choline ABC transporter, permease protein |
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| Protein accession | YP_001859648 |
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| Protein GI | 186472306 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
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| TIGRFAM ID | [TIGR03416] choline ABC transporter, permease protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAGA TCATTCCACT CGGCCGTTGG GTCGACCAGT CCGTTCACTA TCTGCTCGAC
CACGACGCGA GCACATTCGA TTCGATCGGC AAAGCAATCG AGAGCTTCGC CGCGATGATC
GAGCATGGCC TGCAGGCCGT TCCGATGTGG GCGCTGATGG CGTTGTTCAT TGCGGTCGGC
CTGTGGCGCG TGGGCTGGCG ATTTGCGATC TTCGCGACGG CTTCGCTGCT GCTGATCTAC
GCGACGGGGT TCTGGGACCA GACGGTGATT ACGCTCGGCC TCACGCTGTC GTCGACGTTG
ATCAGTCTTG TGTTCGGCAT TCCGCTCGGC ATCTGGGCGG CGAAGAACAA GCATGTGCAG
ATGGTTGTGC GTCCGATCCT CGACCTGATG CAGACGATGC CCGCCTTCGT CTATCTGATT
CCGGCTGCGA TGCTGTTCGG TCTGGGCCGC GTGCCGGGGA TTCTGTCGAC CGTGATCTTC
GCGATGCCGC CCGCCGTGCG CCTGACTAGC CTGGGCATCA AGCACGTGAA CCGCGAGATC
GTCGAAGCAG GGCAGGCGTT CGGCTGTACG CCGTGGCAGT TGCTCTACAA GGTGCAATTC
CCGAATGCAC TGCCGTCGAT CATGCAGGGT GTCAACCAGA CGATCATGAT GGCGCTGTCG
ATGGTGATCA TCGCGTCGAT GGTGGGCGCG GGCGGCCTGG GTAACGACGT GCTCGCGAGT
ATTCAGCGCC TCGATATCGG TCTCGGCTTC GAAAGCGGTC TGTCTGTCGT GTTGCTCGCG
ATCATTCTCG ATCGCATCAC CGAGAGCTTC GGCCGCACGC CAGGCTCGGC GACGGCACCG
CGTTTCGCCG GCTTGCGCAG CGTGATGCGA GTACGGCGCG AGCAGCCGGC TGTCGCGCAA
AGCTAG
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| Protein sequence | MSEIIPLGRW VDQSVHYLLD HDASTFDSIG KAIESFAAMI EHGLQAVPMW ALMALFIAVG
LWRVGWRFAI FATASLLLIY ATGFWDQTVI TLGLTLSSTL ISLVFGIPLG IWAAKNKHVQ
MVVRPILDLM QTMPAFVYLI PAAMLFGLGR VPGILSTVIF AMPPAVRLTS LGIKHVNREI
VEAGQAFGCT PWQLLYKVQF PNALPSIMQG VNQTIMMALS MVIIASMVGA GGLGNDVLAS
IQRLDIGLGF ESGLSVVLLA IILDRITESF GRTPGSATAP RFAGLRSVMR VRREQPAVAQ
S
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