| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3427 |
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| Symbol | |
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| ID | 6244988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 352713 |
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| End bp | 354659 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642595215 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_001859627 |
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| Protein GI | 186472285 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.535868 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCAAC GTTCCGTCAC GCCGTCCGTC ATGGGCCGCG CCGACGCGCT CGCGCAGGCT
CATGCGCGTT CGCGCGAATT CGGCTTGCGC GCATCGGAGG CGCCAGACTT TCATCCGTTG
CAGCCGTTCG CCCTGCGCGA TCTCGTCGAA CTCAACCGCT CGTTGTATGC GCACGCGCTG
CCCGTGATGG AAACGCTGCA CGCGCAGATC GTCGATACGG AAAGCATGGT GCTGCTCACC
GACAGCAACG GCGTGATTCT GCACAGTCTC GGCGACAGCG ATTTCGTCGA GAAAGCGAGC
CGCGTTGCAC TCTGCGCAGG CGTGTCGTGG TCGGAGGCGC ATCGCGGCAC GAACGCCATC
GGCACGGCGC TCGCCGAAGG CGAGCCGACC GTCGTGCACG GCGGCGAGCA TTTTCTCGAG
GCCAACCGCA TCCTCACCTG CTCGTGCGCG CCGATCGCCG ATCCGTATGG CCGCACGATC
GGCGCGCTCG ACGTGAGCGG CGACCCGCGA GGCTTCCACA AGCACACGCT GGCGCTGGTG
CGCATGTCGG CACAGATCAT CGAAAACCAG TTGTTCGCGA ACCAGTTCGG CAATGCCGTG
CGCGTGCGCT TTCATGCGCG CAGCGAGTTC ATCGGCACGC TGTTCGAAGG GCTCGCCGCA
TTCGGCGCCA ACGGCACGCT GCTCGCGGCC AACCGCAGCG CGCTGTTCCA GTTCGGCCGG
CCGCTCGACG CACTGCTAGC ACAGCCGTTC GAGGCGCTGT TCGGCACGGC GTTTCCGGCT
GCGCTGCAGC AGGCATCGCG CGCACCGGGC GAATGCCTGA CGCTGATGCT GCCAAGCGGC
GTGCGCGTGC TGGCGCGTGC TGAATACGCG GCGCGCCCCG CGTTTTCCGC CGACGCACGC
CCGCAGCACA CAGCGGCGCC TGTGCCGCCG GCACCCGCGT CGTGCAAGCC GCGCGCCGCC
GCCATCACCT TCGCGACGCT CGATACGGGC GACGCGCGCA TGGCCGCCGT ACTCGGCCGC
GTCGAGAAAG TGCGTGGCCG CGATATTCCG CTGCTCGTAC TCGGCAAGAC GGGCACCGGC
AAGGAATGGC TCGCGCGCGC GATGCACGAG GAATCGCCGC GACGCGATGC GCCGTTCGTC
GCCGTCAATT GCGCGTCGTT GCCGGACACG CTCATCGAGG CGGAACTGTT CGGCTATGAA
GACGGCGCGT TCACGGGCGC GCGCAAGCGC GGCAACGTCG GCAAGATCGT GCAGGCCGAC
GGCGGCACAC TGTTCCTCGA TGAAATCGGC GACATGCCGC TCGCGCAGCA GGTGCGTCTG
ATGCGCGTGC TGCAGGAGCG CTCCGTGGTG CCGCTCGGCG GCACGCGCGC GGTGCCCGTC
GATGTCCGCG TCGTCTGCGC GACGCACCGC AACCTGCGCG CGATGATCGA AGCGGGCACC
TTCCGCGAAG ACCTCTACTA CCGGATCAAC GGGCTCGTCG TCACCCTCCC CGCGCTGGCC
GAGCGCACCG ATCTGCCCGT GCTCGTCGAA CGGATTCTCG GGCGGCTGCG CTTGGTCGAG
CCCGACAGCG ACAGAATGCC AGCGCGCGTG TCTTTGGAGG TGCTCGACTG CTTCGCGCGC
TGCCGCTGGC CCGGCAATCT GCGGCAACTG GCGAATGTGC TGCGCACGGC GGGCATCATG
GCCGAAGGCG CCGCGGAAAT CGGACTGGAC CATCTGCCCG ACGATTTCCT GCACGACTGC
GAGCCGCCAC GCGACACGCC GCTGCATGCG CTGCCCGCCA CCGATCCTCC TCTTGCAGCG
CGCCCGGCCA ACATGGAAGA ACTGCAGGCG ACGTTGATCG AGCAGACGCT CGCGCGCAAC
AATGGCAATA TTTCGGCGGC CGCGCGCGAA CTGGGTCTCG CCCGGAACAC GGTCTACCGC
TACATGAGGA TGCGCACCAC GCACTGA
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| Protein sequence | MTQRSVTPSV MGRADALAQA HARSREFGLR ASEAPDFHPL QPFALRDLVE LNRSLYAHAL
PVMETLHAQI VDTESMVLLT DSNGVILHSL GDSDFVEKAS RVALCAGVSW SEAHRGTNAI
GTALAEGEPT VVHGGEHFLE ANRILTCSCA PIADPYGRTI GALDVSGDPR GFHKHTLALV
RMSAQIIENQ LFANQFGNAV RVRFHARSEF IGTLFEGLAA FGANGTLLAA NRSALFQFGR
PLDALLAQPF EALFGTAFPA ALQQASRAPG ECLTLMLPSG VRVLARAEYA ARPAFSADAR
PQHTAAPVPP APASCKPRAA AITFATLDTG DARMAAVLGR VEKVRGRDIP LLVLGKTGTG
KEWLARAMHE ESPRRDAPFV AVNCASLPDT LIEAELFGYE DGAFTGARKR GNVGKIVQAD
GGTLFLDEIG DMPLAQQVRL MRVLQERSVV PLGGTRAVPV DVRVVCATHR NLRAMIEAGT
FREDLYYRIN GLVVTLPALA ERTDLPVLVE RILGRLRLVE PDSDRMPARV SLEVLDCFAR
CRWPGNLRQL ANVLRTAGIM AEGAAEIGLD HLPDDFLHDC EPPRDTPLHA LPATDPPLAA
RPANMEELQA TLIEQTLARN NGNISAAARE LGLARNTVYR YMRMRTTH
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