Gene Bphy_3424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_3424 
Symbol 
ID6244985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp350060 
End bp351373 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content61% 
IMG OID642595212 
Productintegrase family protein 
Protein accessionYP_001859624 
Protein GI186472282 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.728899 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAACG AACGTATCAA CCGCGAACTG ATCCGGCGAC TCGAAGCCGA GCGAAAGGCG 
AAGATCGCGG CGGGCGGCAC TTTGAAGGTC CGCGAGATCT ACGATGACCT GCAGCGCGGC
TTTGGCGTGC GCATGAGCGT CAAGGGCTCG CTCTCGTTTG TGTACCGCTG GACCCGACCC
GATGGCGGAC AGCAGCGGAT CGTGATTGGC GATGCGTCGA TGACAGTCGA AGAAGCCCGC
AAAGCACTGG CGAAGTTCAT CGCGCGCACC GATCACAAGG TCGATGACAC GTCGGTGCGC
GTCACGAAGC ACGAGCGGCG CGTCGCCGAT GCGAAGAACG TCGGGATGCC GACAGTAGGC
GACTACCTCG ATGGCGACTA TCGGACCTTT TGGCTCGGCA GCACGCGAAG CGAGACGCCC
GAACAGAACA TCAAAAATAT CCGGCGCGAT TTCCCCGACC TCATGGACAG ACGGCTCGAC
GAAGTCACAC GTCCCGCGAT GAAAAAATGG ATCGAGAAAC GCCTCGCGGA CGGGTGCAAG
GCGACTGGTA TCAATCGCGT ACTCGGCTCG ATTGGTGGCC TGTTCTCGTA CGCTGTGGAG
CACGAAATCA TCGCGGCCAA TCCGTGCGCG AAACTGCGCT GCAAGATCGA TCCCGAAGAA
GACAGCGAGC ACGGCCGCGA ACTGACCGCC GAAGAAGAAC AGCGCCTGCG CGTGGTACTC
GACGAGCGCG AGACGCGCAT CCGTGAAGAA GCGGCGGCGC GTCACGACAG CCGCAAGGTC
GCCACGATAC CGGGCGAGTT CCACTCGTTC GTCGATCACG TCAAGCCCGC GATCCTGCTG
GCGCTCAATA CCGGAATGCG CCGGTCCGAA CTGCTGCGCG CCCGCTGGAC CGCGATTGAC
TGGAAAGCGC AGACCATCAG GATCGAGGCG TGGACATCGA AGGTCAAGCG CACGCGCGTG
ATTCCGATGA ACGTCGAAGC GCTTTCGATC CTAAAGGCGT GGCGCCGTCA GACGAGGTTC
GAGTTCATCT TCACGAACGA GATCGGCGAA TGTCTGCGCG AGGTGCGCGA CTGGAACAAG
ATCAAGCGCG AGGCGCAAAT TCGCGACTTC CGTTTCATGG ATACACGTCA TCACACAGCG
ACGCGCATGA TCAACGAAGG CGCGTCTCCG TATCACGTGC AGAAGTTGCT CGGACACAAA
GATGGCCGCA TGACGCAGCG ATACATGCGG GCGCGCGATG TGAAACTAGC GGAAGCCGTC
GCGCTCCTCG ACGTGCCGCG CCAGGCCGAT GCTGATCACC CGGTAGCAGC ATAA
 
Protein sequence
MANERINREL IRRLEAERKA KIAAGGTLKV REIYDDLQRG FGVRMSVKGS LSFVYRWTRP 
DGGQQRIVIG DASMTVEEAR KALAKFIART DHKVDDTSVR VTKHERRVAD AKNVGMPTVG
DYLDGDYRTF WLGSTRSETP EQNIKNIRRD FPDLMDRRLD EVTRPAMKKW IEKRLADGCK
ATGINRVLGS IGGLFSYAVE HEIIAANPCA KLRCKIDPEE DSEHGRELTA EEEQRLRVVL
DERETRIREE AAARHDSRKV ATIPGEFHSF VDHVKPAILL ALNTGMRRSE LLRARWTAID
WKAQTIRIEA WTSKVKRTRV IPMNVEALSI LKAWRRQTRF EFIFTNEIGE CLREVRDWNK
IKREAQIRDF RFMDTRHHTA TRMINEGASP YHVQKLLGHK DGRMTQRYMR ARDVKLAEAV
ALLDVPRQAD ADHPVAA