| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3402 |
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| Symbol | |
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| ID | 6244963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 334921 |
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| End bp | 335682 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642595190 |
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| Product | triple helix repeat-containing collagen |
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| Protein accession | YP_001859602 |
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| Protein GI | 186472260 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00000301368 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCACGC CCGACCAGAT CGATGTCGTG GTCGTCGAAG GCTTGCGCAT CGTTGTCGAC
GTAACCGACC TCGGCAGTAC GGCTGGCCCG CCCGGTCCTC CGGGACCGGC TGGCGAGCAA
GGCGAACAGG GCCCCGCTGG TCCCGCCGGA TCACAGGGTG TACAGGGCGA TCCGGGACCA
GAAGGTCCGC AGGGTCCGCA AGGCCCCGCC GGGGCTACAG GCGATGCTGG TCCAGCAGGT
CCGCAAGGTG ATACCGGGGC GCAGGGTGTC AAAGGGGACA CTGGCGCGGA CGGCCCTATG
GGACCGGCCG GACCAGCGGG ACCGAAAGGC GACACAGGTG ATGCAGGACC GCGAGGCATT
CAGGGCGATC CCGGTCCGCA GGGTGCGGCT GGCGCAACAG GTGCGCAAGG TCCGAAAGGC
GATACAGGCG CGGGCGCGGT CCCGCTGCCG GTTAATGCGC AGACTGTCAC GGCCTATACG
CTCGTGCTCA CCGATGCGCC CGCACCCAAG TACGAAGGTG GCGTCACGAT GACCAATGCG
GCCGCGAATA CGGTCACGGT GCCGCCGAAC AGCGCGGTCG CGTTCGCAGT CGGCGCGCTC
GTCACCATCG CGCAGCTTGG CGTGGGTCAG ACCACGCTCG TCGCAGGCTC AGGCGTCACG
CTGCGCATGT CGAGCACGCT AGCGCTGCGC GCGCAGTATT CGGCCGCCAC GCTCTGGCAG
ATCGCGGCGA ACGTATGGCT CGTGATGGGA GATCTCACGT GA
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| Protein sequence | MSTPDQIDVV VVEGLRIVVD VTDLGSTAGP PGPPGPAGEQ GEQGPAGPAG SQGVQGDPGP
EGPQGPQGPA GATGDAGPAG PQGDTGAQGV KGDTGADGPM GPAGPAGPKG DTGDAGPRGI
QGDPGPQGAA GATGAQGPKG DTGAGAVPLP VNAQTVTAYT LVLTDAPAPK YEGGVTMTNA
AANTVTVPPN SAVAFAVGAL VTIAQLGVGQ TTLVAGSGVT LRMSSTLALR AQYSAATLWQ
IAANVWLVMG DLT
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