Gene Bphy_3400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_3400 
Symbol 
ID6244961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp333155 
End bp333757 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content67% 
IMG OID642595188 
Productnuclease 
Protein accessionYP_001859600 
Protein GI186472258 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.360285 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.000000903225 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGGCA AGACACGACC GGCTCGCGCG CCACGCGCCG AACCGGAGAA CGTTGCGGGC 
GCAAACGGCT CGCCGGACGC ACCAGAATCG TCCACACCCG CCCCGTGGCC CGCGCTGAGT
ATCGAACGCC GTCCGCTTGT GTCGCTCGTT CCGTACGCGC GCAATGCGCG GCTGCATTCG
GACGCGCAGA TCAACCAGAT CGCGGCGAGC ATGCGCGAAT GGGGATGGAC GCAGCCGGTC
CTGGTCAGCG AGGACGGCAT GATCATCGCC GGTCACGGTC GCGTGCTCGC CGGTCTGCGG
CTCGGACTCG ATGAAGCGCC CGTGATGGTC GCGCGCGGCT GGAGCGAGCC GAAGATCCGC
GCGTACGTGA TTGCGGATAA CCGTCTCGCT GAGACGGCGA CATGGGATCG CGAGATGCTG
GGCGCGGAAC TCGCGGAACT GCGCGATGCG TTCGACCTCA CGCTTACCGG CTTCACTGCG
GGCGAGATCG ACGCGATGGT CGTCACCGAC CTCCCCGCGC TCGGTGTCGA GTATGACGAG
CACGCGGCCG ATGGCGTCAA GTTCATCAAG TGCCCTGCGT GCGGGCATGA ATTCCCGAGG
TAA
 
Protein sequence
MTGKTRPARA PRAEPENVAG ANGSPDAPES STPAPWPALS IERRPLVSLV PYARNARLHS 
DAQINQIAAS MREWGWTQPV LVSEDGMIIA GHGRVLAGLR LGLDEAPVMV ARGWSEPKIR
AYVIADNRLA ETATWDREML GAELAELRDA FDLTLTGFTA GEIDAMVVTD LPALGVEYDE
HAADGVKFIK CPACGHEFPR