Gene Bphy_3394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_3394 
Symbol 
ID6244955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp326640 
End bp327833 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content62% 
IMG OID642595182 
ProductHK97 family phage major capsid protein 
Protein accessionYP_001859594 
Protein GI186472252 
COG category 
COG ID 
TIGRFAM ID[TIGR01554] phage major capsid protein, HK97 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000537798 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACATGA CTGAAATCAA AAAGGCGCTT GAGGAAACGT TCGGCCAGAT CAGGGATGCA 
CAGACCAAGA GCCTCGAAGA AGTCCGTACC GAACTGAAGA CCCTCGACGA CAAGCTCTCG
AAGACCGACA TCAACATGAT CGACCTCGGC CAGAAACTGG CGGGTCTGTC CGAGAAGGGA
CAACGTGAAA CGGGCGCGCA GACGGTCGGC GAATACTTCG TGAAGTCCGA TGCGTTCAAG
GCGATGCAGG GCGGCGGCAA CGCGGGCCGT GCGCGCATCA GTCTCGAAGG CGAACAGCTT
AAGGCCGTCG CGCCGATCTT CGAATCGGTT GACCCGAACC AGTATCCGGT CCCGTCCGAC
CGCCGCACCA CGATCATCCC GCCGGGCATG AACGATGTGT GGATTCGCGA CCTGCTGCCC
GGCGGTACCA CGACCAGCAA CTTGATCGAG TACCCGCGCG AGAAGGCCGC ACAGCTTAAC
GCGGACTACC AGACCGAGGG GCAACTCAAG GCGCAGAGCG ATCTGTCTTT CGAGATGGCG
CAGGCTCCTA TCGTCACTCT CGCTCACTGG CTGCTGGCCT CACGTCAGGT TCTCGATGAT
GTCGCGCAGC TACAGAGCTA CATCAACATG CGCATGACCT ACGGGCTGCG CATGAAGGAA
GACAAGGAAC TGCTGACGGG CGACGGCGCG ACCGGCCACA TCGCCGGTCT GATCACGCAG
GCCGCGCCCT TCGCACCGAC CGATCCGGCG CTGAACGGTG TCGACAATAT CCGGCTCGCG
ATGGCGCAGG TTCAGGCCGC ATTCTATAAC CCGACTTTCG CGGTGATGAA CCCGCTCGAC
TGGGCTTCGA TCCAGCTGAT GAAAAACGCC CAGGGCGAAT ATCTGTTCGG CTCGCCGCTC
GCGCCCGTCA CGCCGCGCCT GTGGAACATC AACATCGATG CGACATATGC GATGGCGCAG
GGTCAGTTCC TTGTCGGCGA TGCGCGTCAG GCGATGGTGT GGGACCGTCA GGCGATCAAC
ATCGAGGTCA GCCGCGAGGA CGTCGATAAC TTCCGCCGCA ACATGGTCAC GATCCTCGTC
GAGGAACGGC TGGGCCTGTC GGTGTTCGCA CAGGCCGCGT TCGCTACGGG CTCGCTTGTC
GCGACGGTTG CGCCCGGCGG CACGAAGTCC AGCAAGTCCA GCGCGAGCGC GTAA
 
Protein sequence
MDMTEIKKAL EETFGQIRDA QTKSLEEVRT ELKTLDDKLS KTDINMIDLG QKLAGLSEKG 
QRETGAQTVG EYFVKSDAFK AMQGGGNAGR ARISLEGEQL KAVAPIFESV DPNQYPVPSD
RRTTIIPPGM NDVWIRDLLP GGTTTSNLIE YPREKAAQLN ADYQTEGQLK AQSDLSFEMA
QAPIVTLAHW LLASRQVLDD VAQLQSYINM RMTYGLRMKE DKELLTGDGA TGHIAGLITQ
AAPFAPTDPA LNGVDNIRLA MAQVQAAFYN PTFAVMNPLD WASIQLMKNA QGEYLFGSPL
APVTPRLWNI NIDATYAMAQ GQFLVGDARQ AMVWDRQAIN IEVSREDVDN FRRNMVTILV
EERLGLSVFA QAAFATGSLV ATVAPGGTKS SKSSASA