| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3383 |
|---|
| Symbol | |
|---|
| ID | 6244944 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 318854 |
|---|
| End bp | 319423 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642595171 |
|---|
| Product | lambda tail assembly I |
|---|
| Protein accession | YP_001859583 |
|---|
| Protein GI | 186472241 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4723] Phage-related protein, tail component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0550778 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0000000000940412 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTCACCG TGCTTTTCTA TGGCGACCTT CGCCGGCGCT TCGGCCGTCG CTATGTGCTC
GACGTGCATT CGCCGCGCGA AGCGATCCTC GCGCTTTGCT TGCAGCTTGA CGGGCTGCGC
CGCTACTTCC GCGATCACGC GACCCAGAAT TTTCTCGTGC GCGGATACCA GGACTATGAC
GAATCCGATC TCGACTATCC GCAGTCCACG GGCACACTCA AGGTCGTCCC GCTGGTCGCG
GGCGCGGGCG CGTGGGGAAA GATCATCGGC GGCGCAGCGC TTGCAGTGGT GGGCTTCGTG
ATCAGCCCAT ACTCGGGCGG GCTCGGGATG GCGCTCGTCA GCATGGGGCT GTCAATGGCG
CTGGGCGGTG TCGCGCAGAT GCTTGCGCCG CGCGCATCCG GCAGCGCGAC GCCAGAGAAA
GCCGACAACC AGCCTTCGCT CGCGTTCGAT GGCGCGGTCA ACACGACCGG CCAGGGCGGT
CCCGTGCCGC TCGGCTATGG GCGCATGATC GTCGGCTCTC AGGTGATCAG CGTGGGCTTC
TCGACCAATA ACGAGATCGT GGTGAACTGA
|
|---|
| Protein sequence | MLTVLFYGDL RRRFGRRYVL DVHSPREAIL ALCLQLDGLR RYFRDHATQN FLVRGYQDYD
ESDLDYPQST GTLKVVPLVA GAGAWGKIIG GAALAVVGFV ISPYSGGLGM ALVSMGLSMA
LGGVAQMLAP RASGSATPEK ADNQPSLAFD GAVNTTGQGG PVPLGYGRMI VGSQVISVGF
STNNEIVVN
|
|---|
| |