| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3381 |
|---|
| Symbol | |
|---|
| ID | 6244942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 314761 |
|---|
| End bp | 315546 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642595169 |
|---|
| Product | tail collar domain-containing protein |
|---|
| Protein accession | YP_001859581 |
|---|
| Protein GI | 186472239 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.278835 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.000000000100675 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACACAGG TCCCCAACTA CCAGGTTCCC GCGCATCCGT CCGGTCTCGA CATGCGCACG
CAGCTGAACA ACATCGTGCT TGCGCTGATC GGCGACAACA GCGGGCCCGT AGCACCCACG
CAGACCTATC CGGGCATGTG GTGGGGAGAT ACGACCGCGA AGCGCTGGAA GCACCGCACG
AACGCGGACG ACGGGTGGAT CGATGTCGGT CCGCTCGATG ACATTCTCGG CGACTTCCGC
AGCGCGTCCC CCAAGGGGAC GATCATCATG TGGTGGGGCG ATGGCACGAA GATCCCCACG
GGCTGGGCGA AGTGCGACGG CACACAGGGG ACGCCCAACC TGACAGACAA GGTACCCGTC
TGTGCCGGTG GCACGTATGC ATCGGGCGCG ACGGGTGGCG CGAACACGGT CACGCTCTCG
GCGAGCCAGA TGCCCGTGCA TGCTCACGGC ATCAGCGATC CGGGGCACGG GCACGGCGTA
GCGGACGGCG GCCACAATCA CAGCGTATGG GACAACGGCC ACCAGCACAC GCTTCCTAAC
CTCGGTTCGG TGCAAGCGGG TTCGGACAAC GGCGGTGCGA GCAGCCCGGT ATCGACGGGC
TACGGATCGA GCCGCTACCA GAACCCGACC GACGCGGGCG GGGGCAATCA CGGCAACAAC
GCGAGCGGCG CGGGTATCGG CATCTATGGG AACGGAACCG GCATCGGCAT CCAGAACGCG
GGCGGCGGCG CTGCCGTCGA TATCCGGCAG CCGTATTACG CGCTGTGGTT CCTGATGAAG
CTCTAG
|
|---|
| Protein sequence | MTQVPNYQVP AHPSGLDMRT QLNNIVLALI GDNSGPVAPT QTYPGMWWGD TTAKRWKHRT
NADDGWIDVG PLDDILGDFR SASPKGTIIM WWGDGTKIPT GWAKCDGTQG TPNLTDKVPV
CAGGTYASGA TGGANTVTLS ASQMPVHAHG ISDPGHGHGV ADGGHNHSVW DNGHQHTLPN
LGSVQAGSDN GGASSPVSTG YGSSRYQNPT DAGGGNHGNN ASGAGIGIYG NGTGIGIQNA
GGGAAVDIRQ PYYALWFLMK L
|
|---|
| |