Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_3363 |
Symbol | |
ID | 6244793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | + |
Start bp | 301924 |
End bp | 302658 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642595152 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001859564 |
Protein GI | 186472222 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0676561 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000000000000226443 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGATAACAC GCACACCGAG ACACCGCCCC GCAGCGGAAG GCGGCTATCA GCGCGGCGAA GAGACCCGCG CAAAGATCAT CGAGGCGGCG CTGGGGCTGT TCGGCGAGCG CGGCTTCGAA GGCGCGTCCA CGCGCGAGAT TGCCGAGCAT GCGGGCGTCA ACGCGCCCGC ACTCGTGTAT TACTTCGACA ATAAGGAAGG CGTCTATCAG GCGTGCGTCG AGTACATCAT GACGAGCGTC GGCGCCTATT TCGCGGATGC CGTCGCCGCC GCCCAGACGG TGCTGGAGGG CAAGCCATCC GACGACGAAC TGATCGACGC GTTCCGCGTG ATTCAGGCAC GCGTCGCCAG TTATCTGTTC ACGACGGAAA CGCCCGCCAC GTGGCGGCTA TTCATGGCGC GCGAGCAGGC GGGCCTCGGT CCCGCATTCA GCGCCGAGCG ACTGAACGAG CGCATGCGCA AGCCGCTGCT GAGCGTCAGC TCGGAAATCG TCGGCCGGCT GCTCGGGCGG CCCGCAGACG ATCCTGAAAC GATCATCAGG CTGCTGGCGA TCAACGGGCA ACTCGTGTCG TTTCACCTCA CGCGTTGCAC GGCATTGTCT GCGCTGCAGT GGAAATCGAT CGACGGCGAG CGCCTGCAGC AGCTCTGCGC ATTGATCGAC GAACAGAGCG TTATCCTGTT GCGAGCGATG GTCGACATGC GCGAAGCGAA CAAGCAACGA CGCAAGAAAA AGTAA
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Protein sequence | MITRTPRHRP AAEGGYQRGE ETRAKIIEAA LGLFGERGFE GASTREIAEH AGVNAPALVY YFDNKEGVYQ ACVEYIMTSV GAYFADAVAA AQTVLEGKPS DDELIDAFRV IQARVASYLF TTETPATWRL FMAREQAGLG PAFSAERLNE RMRKPLLSVS SEIVGRLLGR PADDPETIIR LLAINGQLVS FHLTRCTALS ALQWKSIDGE RLQQLCALID EQSVILLRAM VDMREANKQR RKKK
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