Gene Bphy_3351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_3351 
Symbol 
ID6244781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp287700 
End bp289373 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content67% 
IMG OID642595140 
ProductNERD domain-containing protein 
Protein accessionYP_001859552 
Protein GI186472210 
COG category[R] General function prediction only 
COG ID[COG3972] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.164276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.000169391 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCCGCA TTGTTCCCGA CGACTGGAAA AGCCTCGCCA CCACGGGCGC CGCCGCGCGC 
GAGCGCGAAA CGCTGGCGTT GCTCGAAGAA GCGCTGCCGC GCGACTACAC CGTCTATCAC
GGCGTGCACT GGACGCGGCT GCACGAAGGG TTCTCCGTCT TCGGCGAGGC CGACTTCGTG
ATCGTGAGCC CGTCGGGGCG CGTGATGATC GTCGAGCAGA AAACCGGCTT CCTGCGCGAA
ACGCCCAAAG GGCTCGTCAA GGTCTACATG CAGACCGAGC GCAATGTCGC GATCGCGCTC
GCGCGCACGA TCGAAGGGCT GCACCGGCGC TTCACGGCGG CCTTCGGCGC GGGCACCTAT
TTCATCGAAG AGCTGCTGTA TTGTCCTGAT CACGTGGTCC GGGACGCGGC CATCGCGGGC
GTGAACCCGG CGCGCATCGT CGACGCGACG CGCAAGGACA GTCTCATCGA GACCATACGC
ACGGCGCTGC CCGGCGACGA GCCGCGACTC GCGTGCGCGT CGAAGATCCA CCATTTTCTC
GCCGACGAAC TCGCGCTCTC GCCCGACGCG AGCGCGCTGG TCGGTCAGGC AGGCACGCTC
GTCACGCGGC TCGCGGGCGG GCTGGCGACA TGGGCGCGGC GGCTCGAATT CTCGCCGTTC
CGGCTGCGCG TGATCGGCAC CGCGGGCTCG GGCAAGACGC AACTGGCCGT GCAGGTAATG
AAGGACGCCG TCGCGCGCGG CGAGCGGCCA CTCTACGTGT GCTTCAACCG GCCGCTGGCG
GATCACATCG CGCGCGTCGC GCCGCCGCAG GCGAAGATCG CGAACTATCA CCAGCTATGC
GACTGGATCG TGCGGGAAAG CGGCCGTGCC CCGGATTTCC AGAGCAACGA CGTGTTCGAC
CAGCTCGAAA GCGCCTTCGC TGCGACGCCG ATCGATACCG GCTGGCAATA CGACGTGCTG
ATCGTCGACG AAGGGCAGGA TTTCCAGCAG CCGTGGGTGC CCGCGCTCGA ACGGCTGCTG
AAGCCGGGCG GCGCGTGGTG GTGGCTCGAA GATCCGCTGC AGAATCTGTA CATGCGCGAG
CCCGTCGCGC TGCCCGGCTG GACGGTACTG CGCGAATCGA CCAACTACCG CAGTCCGCGA
GACATCCTCG GCTATCTGCG CAACGTCGTC GGCGCGACGG TGCCGCTGGC GGGCAGCCTG
ACGGCGGGCG GGCCGTTCGA CGGCTCCGAC ATTTCGCTGT CGACCTACGA CGAGACCCAG
ACGCCCGAAA GCTGCATCGA TGCGACCAAG CGCGCGATCA CGCAGGCGCT CGCGCTCGGC
TTTCGCAAGC AGGACATTGC CGTGCTGTCG TTTCGCGGAC GCGAAGGCTC GGTGCTGTGG
CCGCTCGATC ACCTCGGCCC GCACCGGCTG CGCAGCTTCA CGGGCAAGTA CGATCTGTTC
GGCAATCCCG CTTACCGGGA GGGCGACGTG CTGCTCGACT CGATCTACCG CTTCAAGGGG
CAGTCGGCGC CGTGCGTGAT CCTGAGCGAA GTGGATTTCG ACGCGTTCGA CGAACGCAAC
GCGCGCAAGT TGTTCGTCGG CGCGACGCGC GCGACGATGA AGCTGATCGT GGTCGCGTCG
CAGCGCGCCG CGCGGCATCT GCAACTGGGC GAGGCGAAGG AGCAGGTGGC CTAG
 
Protein sequence
MARIVPDDWK SLATTGAAAR ERETLALLEE ALPRDYTVYH GVHWTRLHEG FSVFGEADFV 
IVSPSGRVMI VEQKTGFLRE TPKGLVKVYM QTERNVAIAL ARTIEGLHRR FTAAFGAGTY
FIEELLYCPD HVVRDAAIAG VNPARIVDAT RKDSLIETIR TALPGDEPRL ACASKIHHFL
ADELALSPDA SALVGQAGTL VTRLAGGLAT WARRLEFSPF RLRVIGTAGS GKTQLAVQVM
KDAVARGERP LYVCFNRPLA DHIARVAPPQ AKIANYHQLC DWIVRESGRA PDFQSNDVFD
QLESAFAATP IDTGWQYDVL IVDEGQDFQQ PWVPALERLL KPGGAWWWLE DPLQNLYMRE
PVALPGWTVL RESTNYRSPR DILGYLRNVV GATVPLAGSL TAGGPFDGSD ISLSTYDETQ
TPESCIDATK RAITQALALG FRKQDIAVLS FRGREGSVLW PLDHLGPHRL RSFTGKYDLF
GNPAYREGDV LLDSIYRFKG QSAPCVILSE VDFDAFDERN ARKLFVGATR ATMKLIVVAS
QRAARHLQLG EAKEQVA