Gene Bphy_3311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_3311 
Symbol 
ID6244742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp246561 
End bp247985 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content65% 
IMG OID642595101 
Productmajor facilitator transporter 
Protein accessionYP_001859513 
Protein GI186472171 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.799238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACCA CTGCTTCCGC CAAACGAGCC AGCGCTGCTG CGCGGCTCGA ACGCCTGCCG 
TTTTCGGGCT ATCACCGCAC CATCTTCATC ATCATCGCGA TTGCGTTCTT CTTCGACTCC
GTCGATCTCG GCACGATGAC GTTCGTGCTC GGCTCGATCA AGACGGAGTT TGGGCTGTCG
AGCGCAACGG CAGGGCTCGT CGCCAGCGCG AGTTTCTTCG GCATGGTGCT CGGGGCTGCC
GTTGCGGGCC TGTTCGCGGA CCGCTTCGGA CGCCGCCCGG TCTTTCAATG GAGCATGGTG
CTGTGGGGCG TCGCGTCGTA TCTGTGCTCG ACGGCGCAAA GCGTCGATGC GCTGATCGTG
TATCGCGTGC TGCTCGGCAT CGGCATGGGC ATGGAATTCC CGATCGCCCA GACGCTGCTA
TCCGAATTCG TGCCGACGGC TTCGCGGGGA CGCCTCGTCG CGCTGATGGA CGGCTTTTGG
CCGCTCGGCT TCATCACGGC AGGCTGCGTG TCGTACTTCG TGCTGCCGCA CTTCGGCTGG
CGCACCGTCT TCGCGCTGCT CGCGATCCCC GCCGTATTCG TGCTGATCGT GCGGCGCATC
GTGCCTGAAT CGCCGCGCTG GCTCGAACAT CGCGGACGTC TCGCGCAAGC CGACGCCGTG
CTCGACACCG TCGAGGCGAA GGTCATGAAG TCCAAAGGAC TGCGTTCGCT GCCCGCGGCG
TCGCTGCTTG CCGAGCCGGC CGCACCTTCG CAGCATGGCG CATTGCGTGA GATCTGGAGC
GCCGCCTATC GTCAGCGCAC GGTCATGGTC TGGGCATTGT GGTTTTTCGC GCTGCTCGGC
TTCTACGGCC TCACGTCCTG GCTTGGTGCA CTGATGCAGC AAGCGGGCTT CGCCGTGACG
AAATCGGTGC TTTACACGGT GCTCATTTCG CTTGGCGGCG TGCCGGGCTT TCTGTGCGCC
GCGTGGCTCG TCGAGCGTTG GGGACGTAAG CCGACGTGTA TTGCTTCGCT GGTCGGCGGC
GGCGTGATGG CTTACGCATA TGGCCAGACC GCACTGCATG CGGACAGCGT GACGCTGCTG
ATCTGCACGG GCCTCGCGAT GCAGTTCTTC CTGTTCGGCA TGTGGGCCGT GCTCTATACC
TATACGCCCG AACTCTACGG CACGGGCGCG CGCGCTACGG GGTCCGGCTT TGCGTCGGCA
ATCGGCCGTA TCGGCTCACT GATCGGCCCG TATGCGGTCG GCGTGGTGCT GCCCATCTTC
GGACAGGGCG GCGTGTTCAC GCTCGGCGCG CTGTCGTTCG GTGTCGCGGC GTTCGCCGTG
TGGGTGCTCG GCATCGAGAC GAAGGGCCTC TCGCTTGAAA CGCTCGTGTC GCATGTCGAC
GACGATGCGT CTGCGTGGCG CGTCGCCGCC GACGATGCGC GCTGA
 
Protein sequence
MPTTASAKRA SAAARLERLP FSGYHRTIFI IIAIAFFFDS VDLGTMTFVL GSIKTEFGLS 
SATAGLVASA SFFGMVLGAA VAGLFADRFG RRPVFQWSMV LWGVASYLCS TAQSVDALIV
YRVLLGIGMG MEFPIAQTLL SEFVPTASRG RLVALMDGFW PLGFITAGCV SYFVLPHFGW
RTVFALLAIP AVFVLIVRRI VPESPRWLEH RGRLAQADAV LDTVEAKVMK SKGLRSLPAA
SLLAEPAAPS QHGALREIWS AAYRQRTVMV WALWFFALLG FYGLTSWLGA LMQQAGFAVT
KSVLYTVLIS LGGVPGFLCA AWLVERWGRK PTCIASLVGG GVMAYAYGQT ALHADSVTLL
ICTGLAMQFF LFGMWAVLYT YTPELYGTGA RATGSGFASA IGRIGSLIGP YAVGVVLPIF
GQGGVFTLGA LSFGVAAFAV WVLGIETKGL SLETLVSHVD DDASAWRVAA DDAR