| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3289 |
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| Symbol | |
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| ID | 6244720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 216671 |
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| End bp | 217636 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642595079 |
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| Product | choline ABC transporter, periplasmic binding protein |
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| Protein accession | YP_001859491 |
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| Protein GI | 186472149 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACAC GCTGGAGAAG TTCGCTTGCC AAGGCCGCGT TGATCTTTTC TGCATTTGGC
ATGGCCGTGA CGGGATCGTC GCACGCCGCT GAACCGCAAA GCTGCACACA GGTGCGCATG
GCCGATCCCG GCTGGACCGA CATCGATGCG ACGAATGCGG TGGCGGGTGT GCTGCTCAAG
GCGCTCGGCT ATCAGCAGAA CGTGTCGAAC CTGTCGGTGC CGATTACCTA TCAGGGCCTG
AAAAAAGGTC AAATCGACGT ATTTCTGGGC AACTGGATGC CTGCGCAGGG ACCGCTCGTC
AAACCGTTCG TCGACGAGCA CTCGATCGAC GTGCTGCACG CGAATCTGAC CAACGCGAAA
TTCACACTTG CCGTGCCGGA CTATGTCGCT GCCGCGGGTG TGCATTCGTT TGCCGATCTC
GTCAAACACG CGGATCAGTT CAACGGCAAG ATCTATGGCA TCGAACCGGG CGCACCCGCG
AATCAGAACA TCAAGAAGAT GATTGCGGAT AAGGCTTTCG GTCTTGGCGA CTGGAAGGTG
GTCGAATCGA GCGAAACGGG CATGCTGACG CAAGTGGAGC GGGCCGTGCG CGACAAGCAG
TGGATCGTGT TCCTCGCCTG GGAACCGCAT TTGATGAATA CGAAATTCCA CCTGACGTAT
TTGTCGGGCG GCGACGCGTA TTTCGGCCCG AACTACGGCG GCGCGACGGT GAATACGGTT
ACGCGTCCGG GCTTTGCCGG GCAGTGCACG AATCTCGCGA AGCTGTTTCA GCAGATGACG
TTCAATGTCG ACATGGAGAA CCAGATCATT GCGAACGTTC TGCAAAACAA GGTGGACATC
AATACGGCGG CATTGACTGC GCTAAAAGGT AATCCCGCTT TGCTAAATAC GTGGCTTAAA
GGTGTGACGA CCACGAACGG TGCGGATGGT TTGCAGGCAG TTCAAACGCA GCTGGGTATT
CACTAA
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| Protein sequence | MNTRWRSSLA KAALIFSAFG MAVTGSSHAA EPQSCTQVRM ADPGWTDIDA TNAVAGVLLK
ALGYQQNVSN LSVPITYQGL KKGQIDVFLG NWMPAQGPLV KPFVDEHSID VLHANLTNAK
FTLAVPDYVA AAGVHSFADL VKHADQFNGK IYGIEPGAPA NQNIKKMIAD KAFGLGDWKV
VESSETGMLT QVERAVRDKQ WIVFLAWEPH LMNTKFHLTY LSGGDAYFGP NYGGATVNTV
TRPGFAGQCT NLAKLFQQMT FNVDMENQII ANVLQNKVDI NTAALTALKG NPALLNTWLK
GVTTTNGADG LQAVQTQLGI H
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