| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3286 |
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| Symbol | |
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| ID | 6244717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 212955 |
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| End bp | 213905 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642595076 |
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| Product | choline ABC transporter, periplasmic binding protein |
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| Protein accession | YP_001859488 |
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| Protein GI | 186472146 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.424863 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTGGA TCAACCAGGC TGTTTCCGCA TGTCTTGCCA GCCTTCTGGC TGCGCTGTCA
TTGCCCGCAC TCGCGCAGGA TCCGCCCACC TGCCGCGCCG TGCATTTCGC GGATATCGGC
TGGACCGACA TCACGTCGAC AACGGCGCTC GCGTCGACGG TATTCGAAGG GCTGGGGTAT
CAGCCGGTGA CGACGGTGGC CTCCGTGCCG ATCTCGTTCG CCGGCTTGAA GAGCAAACAG
CTGGATGTGT CGCTTGGCTA CTGGTGGCCG GTGCAGGAAA AGGCGATTGC GCCTTTTGTC
GAGGCGAAAT CGATCAACGT ATTGCAGCCG CCCAATCTGA CGGGCGCGAA AGCGACCTTT
GCCGTGCCGA CCTATGAATA CGACGCGGGG CTCAAGACCT TTGCCGACAT CGCAAAGCAC
CGCGCGGAAC TCGACGGAAA GATCTACGGC ATCGAGCCGG GCAGCAGTGC CAATGCCGCG
ATTCAGAAAA TGATCGCGAC CAACCAGTTC GGGCTCGGCG GTTTCAAGCT CATCGAATCG
AGCGAGGCGG GCATGCTGGT CACAGTCGAT CGCGCGGTGC GCGAGAAGAA GTGGGTCGTT
TTTCTCGGCT GGCAGCCGCA TCCGATGAAC ATCCAGATCG ATATGAAGTA CCTGAGCGGC
AGCGAAGGCG TATTCGGGCC GAACGATGGC GAAGCGCGCG TCTATACGCT GACATCGCCG
GACTTTCTGA CGCGTTGTCC GAATGCCGGC AAGCTCGTGA GCAACCTGCG CTTCACCACG
CAACTCGAGA ACGTGGTGAT GCAATCCGTG ATGAACAAGG AGAAGCCTTC CGAAGCCGCT
AAAGCCTATT TGAAAAAGAA TCCGCAAGTA CTCGACGAAT GGCTGGCGGG CGTGAAGACA
TACGACGGCA AGGATGGCTT GCCGGCGGTG AAGGCTTATC TCGGTCTTTA A
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| Protein sequence | MKWINQAVSA CLASLLAALS LPALAQDPPT CRAVHFADIG WTDITSTTAL ASTVFEGLGY
QPVTTVASVP ISFAGLKSKQ LDVSLGYWWP VQEKAIAPFV EAKSINVLQP PNLTGAKATF
AVPTYEYDAG LKTFADIAKH RAELDGKIYG IEPGSSANAA IQKMIATNQF GLGGFKLIES
SEAGMLVTVD RAVREKKWVV FLGWQPHPMN IQIDMKYLSG SEGVFGPNDG EARVYTLTSP
DFLTRCPNAG KLVSNLRFTT QLENVVMQSV MNKEKPSEAA KAYLKKNPQV LDEWLAGVKT
YDGKDGLPAV KAYLGL
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