Gene Bphy_3272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_3272 
Symbol 
ID6244703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp197055 
End bp198257 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content52% 
IMG OID642595062 
Productcapsule polysaccharide biosynthesis protein 
Protein accessionYP_001859474 
Protein GI186472132 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3562] Capsule polysaccharide export protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATTG CCGTCGTAAT CGACTCACTG GAGCGCTTCT ACTTCGTCCG AAGGCTCGTA 
AAAGCGCTCG ACAAGGAAGG CGATTTCGTC TTTATGACCA GTGAGCCGCT TGCTCATTTA
TTCTTTCGAC TCGAAGGGCG ACACTCGATC TATCTGCGAC GTGCTAAGAA TAATTCGTCC
GGATTAGCGT ACGGCTCTTC ATTGTTTGAT CGCTCGATCG AGGTTATGAA TGGGACTATT
GACGCGCATG TTGCTCGCCA GGATTGGATG GCGACTTTTA CCGCAGCTTT GGACGTTTTT
AACCGCCTTG CCATTACGGT ATGTGTGATG TGGAACGGGC AACAACTGAT ATGTCGTGCC
GTCGGCCATG CGTGTTCAAC ATACGGTGTG CGGGTGCGGT TTCTCGAACT GTCGAATCTG
CCCGAAAAGT TGTTCGCCGA CGATGAAGGG GTAAATGCGC TATCGACGGT CGCCCGCGAC
CCCTCGATCA TCGATCGCTT TTCCATGCCG GACTTGTCAG AGCACGAACG ATGGCTGAGG
CGATACGAGG AATATAAGAG AAGACCCCTT CCACAATCAC AGACTTCGAT CCGTCGAAAA
GGGCTTTCCC TGTTGAACTA CGCAGTGAAG GTCTTGACTC AGGGCGTTGG CCGGAAACGA
CTCGATCGAA GCCGCGCTAG CAATGGCGTG AGGTTGCCCG CCATTGCGAG CTCGATAGGG
GAAGACGCGT TGATCTCGCG ACGTTATGTC TTTTTGCCTT TGCAGGTCTC GGGCGATACG
CAGATCAAAC TGCATTCGGA TGTCGACAAT TTGGAGGCGA TCAGGATTGC ACTCGAGCTC
GCCGAAAGTG AGGGAATGGA CCTGATCGTG AAGCTTCATC CGGCCGAGAA CGATAGAGCA
GTGATTGACG AAATTGCACG ACTGCAGACT ATCCATCAAT TCCAAATCGT GACAACTGCA
GCGGTGGATT TGATCAAGCA CGCGGCGATG GTCGTCACCA TTAACTCAAC TGTCGGTCTT
GAAGCAATGC TTTACGGAAA AAAGGTCGTT GCGCTGGGCC GCTGCCTATA CAGAGAGTTC
GATCGAGATC GTCTGATGAA GTACATCCAT GGTTTCTTGG TGGACGGTAT CGACTATTTC
GGCAACGGTC CAATCGACCC CCGCGCCGCA CGGCGTGTTT TTTCAAATGA TGGACGAATA
TGA
 
Protein sequence
MTIAVVIDSL ERFYFVRRLV KALDKEGDFV FMTSEPLAHL FFRLEGRHSI YLRRAKNNSS 
GLAYGSSLFD RSIEVMNGTI DAHVARQDWM ATFTAALDVF NRLAITVCVM WNGQQLICRA
VGHACSTYGV RVRFLELSNL PEKLFADDEG VNALSTVARD PSIIDRFSMP DLSEHERWLR
RYEEYKRRPL PQSQTSIRRK GLSLLNYAVK VLTQGVGRKR LDRSRASNGV RLPAIASSIG
EDALISRRYV FLPLQVSGDT QIKLHSDVDN LEAIRIALEL AESEGMDLIV KLHPAENDRA
VIDEIARLQT IHQFQIVTTA AVDLIKHAAM VVTINSTVGL EAMLYGKKVV ALGRCLYREF
DRDRLMKYIH GFLVDGIDYF GNGPIDPRAA RRVFSNDGRI