Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_3272 |
Symbol | |
ID | 6244703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | - |
Start bp | 197055 |
End bp | 198257 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642595062 |
Product | capsule polysaccharide biosynthesis protein |
Protein accession | YP_001859474 |
Protein GI | 186472132 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3562] Capsule polysaccharide export protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATTG CCGTCGTAAT CGACTCACTG GAGCGCTTCT ACTTCGTCCG AAGGCTCGTA AAAGCGCTCG ACAAGGAAGG CGATTTCGTC TTTATGACCA GTGAGCCGCT TGCTCATTTA TTCTTTCGAC TCGAAGGGCG ACACTCGATC TATCTGCGAC GTGCTAAGAA TAATTCGTCC GGATTAGCGT ACGGCTCTTC ATTGTTTGAT CGCTCGATCG AGGTTATGAA TGGGACTATT GACGCGCATG TTGCTCGCCA GGATTGGATG GCGACTTTTA CCGCAGCTTT GGACGTTTTT AACCGCCTTG CCATTACGGT ATGTGTGATG TGGAACGGGC AACAACTGAT ATGTCGTGCC GTCGGCCATG CGTGTTCAAC ATACGGTGTG CGGGTGCGGT TTCTCGAACT GTCGAATCTG CCCGAAAAGT TGTTCGCCGA CGATGAAGGG GTAAATGCGC TATCGACGGT CGCCCGCGAC CCCTCGATCA TCGATCGCTT TTCCATGCCG GACTTGTCAG AGCACGAACG ATGGCTGAGG CGATACGAGG AATATAAGAG AAGACCCCTT CCACAATCAC AGACTTCGAT CCGTCGAAAA GGGCTTTCCC TGTTGAACTA CGCAGTGAAG GTCTTGACTC AGGGCGTTGG CCGGAAACGA CTCGATCGAA GCCGCGCTAG CAATGGCGTG AGGTTGCCCG CCATTGCGAG CTCGATAGGG GAAGACGCGT TGATCTCGCG ACGTTATGTC TTTTTGCCTT TGCAGGTCTC GGGCGATACG CAGATCAAAC TGCATTCGGA TGTCGACAAT TTGGAGGCGA TCAGGATTGC ACTCGAGCTC GCCGAAAGTG AGGGAATGGA CCTGATCGTG AAGCTTCATC CGGCCGAGAA CGATAGAGCA GTGATTGACG AAATTGCACG ACTGCAGACT ATCCATCAAT TCCAAATCGT GACAACTGCA GCGGTGGATT TGATCAAGCA CGCGGCGATG GTCGTCACCA TTAACTCAAC TGTCGGTCTT GAAGCAATGC TTTACGGAAA AAAGGTCGTT GCGCTGGGCC GCTGCCTATA CAGAGAGTTC GATCGAGATC GTCTGATGAA GTACATCCAT GGTTTCTTGG TGGACGGTAT CGACTATTTC GGCAACGGTC CAATCGACCC CCGCGCCGCA CGGCGTGTTT TTTCAAATGA TGGACGAATA TGA
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Protein sequence | MTIAVVIDSL ERFYFVRRLV KALDKEGDFV FMTSEPLAHL FFRLEGRHSI YLRRAKNNSS GLAYGSSLFD RSIEVMNGTI DAHVARQDWM ATFTAALDVF NRLAITVCVM WNGQQLICRA VGHACSTYGV RVRFLELSNL PEKLFADDEG VNALSTVARD PSIIDRFSMP DLSEHERWLR RYEEYKRRPL PQSQTSIRRK GLSLLNYAVK VLTQGVGRKR LDRSRASNGV RLPAIASSIG EDALISRRYV FLPLQVSGDT QIKLHSDVDN LEAIRIALEL AESEGMDLIV KLHPAENDRA VIDEIARLQT IHQFQIVTTA AVDLIKHAAM VVTINSTVGL EAMLYGKKVV ALGRCLYREF DRDRLMKYIH GFLVDGIDYF GNGPIDPRAA RRVFSNDGRI
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