| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3197 |
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| Symbol | |
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| ID | 6244880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 107221 |
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| End bp | 108864 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642594991 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001859403 |
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| Protein GI | 186472061 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0130434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTACG ACTTTATAGT GGTTGGTGCG GGTAGCGCGG GTTGTGTAAC AGCGAACCGT
CTCGTTCGAG AATGGCAGGC TAAAGTGCTG CTGATTGAAG CAGGCCCTTC TGCAAAGAGT
GCGCTGATCC GGATGCCCGC TGGAACGTTC AAGATGCTCT TCAACGGCAG CCCGTTTATT
AAGCGATACG CTTCATCGCC ACAGGCCTCA CTAGGTGAGC GGGTCGTTTC GATTCCACAG
GGAAACGTAG TCGGCGGCGG TAGCTCGGTC AACGCAATGG CATACACGCG GGGATCGCGT
GCCGACTATG AGCGGTGGTT TGCGGCGACG GGCGATCCGG GCTGGAGCTG GAACGGCTTG
TTGCCCTATT TCAAAAAGCA GGAGGGAAAT CAGCGGTTTG ACAATGAATC TCATGGTTCC
GATGGGCCGC TTAAAGTCTC GGACCCGCGG TACACGGTCG AAGTCGCAGA CAGATTCGTT
CGAACCATGC AGCGTCACGG AATACCGTAC TCGCCCGATT TCAATGCCGG ACGTCTACAG
GGCGTAGGCT ACATGCAGAC GACAACGTAT CAAGGTCAAC GGTGTAGCGC GGCGGATGCA
TTTCTCACTC CGATCCTGGA CCACCCAGGG TTGACTCTGG TTACAGACGC CGTCGTCGAG
CGCGTTTTGT TCGAAGGAGA CGCGGCAGTC GGCGTTGAAT ACCGAGTAAA GGGAAAACTG
GGTCGCGCGC GGACGTTGAA CGAGGTGGTC CTGTGCGCCG GGGCGTTTGC GACGCCCAAG
CTCCTGATGT TGTCAGGTAT CGGACCTGCA GCGCATTTGA AAGAACAGGG GTTGAAGGTG
CGCGTCGATT CACCTGGGGT CGGCGAGAAT CTGCAAGATC ATAACGTTGC AGTTGTCTCA
ATGACCACCC GTGGGCAATA CGGATATTTC GGTGAAGACC GCGGATTTCG TGCTTTGCGA
AATGCTCTTC GCTATCTTGC GTTCCGCAGC GGCCCCATTG CATCAAATGG TGCCGAAACC
ATGGCCTTCG TCAATCTCGG TGATCCAGCG GCAGAGCCAG ATTTGCAACT ATATTGTGTG
GGAGTAATGT GGCCTGACCC ACAAGGTCCA AAGCCCACGT TTGGGATGAC TCTGATGGCA
AACCTTGTCC GCCCGCGCTC TCGCGGTACG GTGCGCCTTC GATCTGCCGT GCCGTCCGAC
GATGCAGTCG TCAGTCCAAA CTGGCTCCAT GACGTAGCAG ATAGAGAACG TCTCGTTCAG
GCGTTGCGCT ATCTTCGTCG CCTCGCGTCT TCCGAGCCTC TCGCATCAAT TGTGCATGAA
GAAGTCGGGC CAGGCCCTCA CGTTCAGTCA GACGGCGAGC TGCTTGAATA TCTGAAACGA
ACGACGGATT CCAACTATCA TCCGGTCGGA ACCTGCAGGA TGGGTCGTGA GGATGACTCG
ATGTCGGTAT TAACCCCCGA TCTGAGAGTA AAAGGGGTGA GCGGGCTGCG AGTCTTCGAC
GCTTCAATGA TGCCCCACAT TATCAGTTCG AACACCAACG CGACTGTGAT GGCAGTCGCG
GATAGGGCGG TCGATATCAT GATGGCGAAT TGGAACATTC CAGAGGAACG CGACAAGACG
AAAGCGGAAG AACACGCTCA GTAA
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| Protein sequence | MDYDFIVVGA GSAGCVTANR LVREWQAKVL LIEAGPSAKS ALIRMPAGTF KMLFNGSPFI
KRYASSPQAS LGERVVSIPQ GNVVGGGSSV NAMAYTRGSR ADYERWFAAT GDPGWSWNGL
LPYFKKQEGN QRFDNESHGS DGPLKVSDPR YTVEVADRFV RTMQRHGIPY SPDFNAGRLQ
GVGYMQTTTY QGQRCSAADA FLTPILDHPG LTLVTDAVVE RVLFEGDAAV GVEYRVKGKL
GRARTLNEVV LCAGAFATPK LLMLSGIGPA AHLKEQGLKV RVDSPGVGEN LQDHNVAVVS
MTTRGQYGYF GEDRGFRALR NALRYLAFRS GPIASNGAET MAFVNLGDPA AEPDLQLYCV
GVMWPDPQGP KPTFGMTLMA NLVRPRSRGT VRLRSAVPSD DAVVSPNWLH DVADRERLVQ
ALRYLRRLAS SEPLASIVHE EVGPGPHVQS DGELLEYLKR TTDSNYHPVG TCRMGREDDS
MSVLTPDLRV KGVSGLRVFD ASMMPHIISS NTNATVMAVA DRAVDIMMAN WNIPEERDKT
KAEEHAQ
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