Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_3180 |
Symbol | |
ID | 6244865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | + |
Start bp | 90473 |
End bp | 91237 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642594976 |
Product | ABC transporter related |
Protein accession | YP_001859388 |
Protein GI | 186472046 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.219824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCACGG TTTCTAGCCT TAACAAGACA TATCAGACCC GGGAGGGAAA CGAAATTCGC GCGCTTCACG ACGTGAGCTT TGACGTTGAA TCGGGTGAGT TCATTACGGT CGTTGGCCCG AGCGGTTGCG GAAAATCGAC GCTGTTAAAG ATTCTCGCGG GAATCCTGCG GCGTTCCTCG GGCAAGGTCG CCGTAGCGGG CCGGCCGATC GACGGTCCAA ATCGCGAAGT CGGGGTCGTG TTCCAGGCAC CCGTTCTTCT GCCTTGGCGA ACCGTAATAG AGAACATTCT CATGCCGAGC GAGCTGCACG GAAAGGTCGA CAAGACTCAG CGGGATCGTG CCGCGCGGTA CCTGGCAATG GTTGGCCTGG AAGGCTTCGA GGACAAGTAT CCCAGCGAAC TGTCAGGCGG CATGCAGCAG CGCGTGGGCA TCGCGCGCGC TCTTTGTCAC GATCCCACAC TGCTTCTAAT GGACGAGCCG TTCGGCGCAC TCGATGCAAT GACACGCGAG TCAATGAACC TTGACCTGCT GCGCATTCGC GCGGAGAGCG GCAAAACCGT TCTTCTTGTC ACGCACAGCA TTCCCGAAGC AGTATTTCTC GCCGATCGTG TGATTGTGAT GTCACCGCGT CCGGGCCGGA TAACCGACAT TTTGCCAGTC AACCTGCCAC GTGAACGCAA GCTCGAAATG ATCAACTCTG AGCCATTTGG AGCTGTAGTT TCGCGCATCC GCACGCATTT CAACTCTCAC GGGACCCTCG ACTGA
|
Protein sequence | MITVSSLNKT YQTREGNEIR ALHDVSFDVE SGEFITVVGP SGCGKSTLLK ILAGILRRSS GKVAVAGRPI DGPNREVGVV FQAPVLLPWR TVIENILMPS ELHGKVDKTQ RDRAARYLAM VGLEGFEDKY PSELSGGMQQ RVGIARALCH DPTLLLMDEP FGALDAMTRE SMNLDLLRIR AESGKTVLLV THSIPEAVFL ADRVIVMSPR PGRITDILPV NLPRERKLEM INSEPFGAVV SRIRTHFNSH GTLD
|
| |