Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_3176 |
Symbol | |
ID | 6244862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | + |
Start bp | 84670 |
End bp | 85584 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642594973 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001859385 |
Protein GI | 186472043 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.594001 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAACA ACGTCGGCCT GAAGTACTTC ATCGGCGTAG CGCGGTCGGG ATCGATCCGA CGCGCCGCAG AGCAGTTGCA TGTGGCAGCG TCTGCAATCT CACGGCAGAT ACAGATGCTG GAGGAAGAAC TGAACGCAGA GTTGTTCGAA CGCCATCGCG GTCAGAAGTC CCTCAGGCTG ACTGCGGCTG GTGAGTTGCT GCTCAATTAC ACGCGGCTCA TCGAGAACGA ACTTGATCAG GTTCGCGCGG ACATCAGGGC GATCGATACT CTTCAGAAGG GAACCGTCCG GTTAGGCGCC TCCGAGTCAT TCTCACGAGA GTTCCTGCCG AGTTTTCTGC ATCGATTCCA TTCTCAATAT CCCGGGATTA CCTTTAACGT CATCGTGGGC GGCGGGGGTA AACTTGTAGA ACTTCTGGCA AAAGATGAGA TCGATGTTGC GCTCGCGTAT CGTGCTCCGG ATGCGTTCGA CGTACAGGTG ATCGCAGAAA CTCACGTCAC TCCCTGCCTG CTGGTCTCAG CCACTCATCC GTTCGCGAAT CGACGCTCCG TCGATATCGA AGAATGCGGA GAAATTGAGA TCGCCCTCCC GGACGAGTCG CTCACAATCC GCGAAAGCTA TGTGCGTATG TTCTCAAAAG CACGCATTCG ACCTCGCACG ATTCTCGTTA CCAACTCTTT CGAACTGATG CGTGCGGCGG CTGTGTCCGG GTTATGCAAT GCGATCGTCA ACAAATATTT CGGCAATTAC AAGGTGCCGC GGGGGCTCCG GTATGTCCCG CTGCATGGCG AAGGTGTCGA GCGATGGCCC TTGCGGCTGT GCGTACACAC GGGTAGAAGT CTACCTGTGT CGGTCAAGCT GTTCATCGAA CAACTTCAGG CAGAGATGGA CGCCGTGGAC GAGAGCCGCC AATGA
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Protein sequence | MINNVGLKYF IGVARSGSIR RAAEQLHVAA SAISRQIQML EEELNAELFE RHRGQKSLRL TAAGELLLNY TRLIENELDQ VRADIRAIDT LQKGTVRLGA SESFSREFLP SFLHRFHSQY PGITFNVIVG GGGKLVELLA KDEIDVALAY RAPDAFDVQV IAETHVTPCL LVSATHPFAN RRSVDIEECG EIEIALPDES LTIRESYVRM FSKARIRPRT ILVTNSFELM RAAAVSGLCN AIVNKYFGNY KVPRGLRYVP LHGEGVERWP LRLCVHTGRS LPVSVKLFIE QLQAEMDAVD ESRQ
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