| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3153 |
|---|
| Symbol | |
|---|
| ID | 6244844 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 60646 |
|---|
| End bp | 61755 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642594955 |
|---|
| Product | cobalamin biosynthesis protein CobW |
|---|
| Protein accession | YP_001859367 |
|---|
| Protein GI | 186472025 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0523] Putative GTPases (G3E family) |
|---|
| TIGRFAM ID | [TIGR02475] cobalamin biosynthesis protein CobW |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.175243 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACAC AGATGCGCAA GATTCCCGTG ACGATCGTCA CAGGCTTTCT CGGCAGCGGC
AAGACGACGT TGATGCGTCA CATCCTTCAG CGCGCGGGCG GCCTGCGCAT CGCTGTGATC
GTCAACGAGT TCGGCGAGCT CGGCATAGAC GGCGAAATCC TCAAGGGTTG CGGCATCGGC
TGCGATGAGA ACGGCAACGA GACGGAAGGC CAGCTGTACG AGCTCGCCAA CGGCTGCCTC
TGCTGCACTG TGCAGGAAGA GTTCCTCCCG GTGATGGAGC AGCTCGTCGA GCGCCGCGGC
CAGATCGACC ATGTGCTGAT CGAAACCTCC GGGCTCGCGT TGCCGAAGCC GCTCGTGCAG
GCATTCAACT GGCCGTCGAT CAAGAACAGC TTCACCGTCG ATGCCGTCGT CACGGTGGTC
GACGGCCCGG CTGTCGCGAG CGGCCAGTTC GCGGATGACC CTGTCGCCGT CGACCGGTTG
CGCAAGGCCG ATCCCAACCT CGATCACGAA TCGCCGCTGC ATGAACTGTT CGAAGACCAG
CTGTCGGCGG CTGATCTCGT GATCCTCAAC AAGACCGATC TGCTCGATGA AGCGCAGCAA
GCCGCCGTCG AATCGACGCT GCGCGAAGAG ATACCGCCGC AGGTGAAAGT CGTGCGCGCA
CACATGGGGC AGCTCGATCT GCACGCGCTG CTCGGGCTCG AATCAGCATC GGAAGAAACG
ATTCATTTGC GGCACGACCA TCACGGTTCC GCCGATGATC CCGATCACGC GGATCACCAT
CACGACGAAT TCGATTCCGT CGTCGTGACC GTGCGGGCGC CGTCGCGCGA GACGATGATC
GCGGCGCTCA CGCAGGTGGT CGAAGGGCAC GCGATCTATC GCGTGAAGGG TTTTGCAGCG
CTGCCGGGCG CGGCGATGCG CCTCGTGATT CAAGGCGTGG GTCGGCGCTT CGACAGCTAC
TTCGACCGGC GCTGGCAGGC GGGCGAAGTC GATAGCGCTA CGCTGAGCCG CTTCGTGCTG
ATCGGCTCAG ATCTCGATCA GCGGGTGCTG CAGCGCGCGC TCGACGAAGC CTTGAACGAC
ATCATGAGCG CGCAGGCGCA ACAGGCCTGA
|
|---|
| Protein sequence | MQTQMRKIPV TIVTGFLGSG KTTLMRHILQ RAGGLRIAVI VNEFGELGID GEILKGCGIG
CDENGNETEG QLYELANGCL CCTVQEEFLP VMEQLVERRG QIDHVLIETS GLALPKPLVQ
AFNWPSIKNS FTVDAVVTVV DGPAVASGQF ADDPVAVDRL RKADPNLDHE SPLHELFEDQ
LSAADLVILN KTDLLDEAQQ AAVESTLREE IPPQVKVVRA HMGQLDLHAL LGLESASEET
IHLRHDHHGS ADDPDHADHH HDEFDSVVVT VRAPSRETMI AALTQVVEGH AIYRVKGFAA
LPGAAMRLVI QGVGRRFDSY FDRRWQAGEV DSATLSRFVL IGSDLDQRVL QRALDEALND
IMSAQAQQA
|
|---|
| |