Gene Bphy_3123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_3123 
Symbol 
ID6244814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp17953 
End bp19107 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content65% 
IMG OID642594925 
ProductDNA-directed DNA polymerase 
Protein accessionYP_001859337 
Protein GI186471995 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.401966 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTCA CTGTCCGCCG TATCGCGCAT CTCGACATGG ACGCGTTCTA CGCATCCGTC 
GAATTGCTGC GCTATCCGGA GTTGCGTGGT ATGCCAGTCG TGATCGGCGG AGGGCGCAAT
GCGGCGCCCG AAACGCTGGC TGACGGTACA CGCCGTTTTG CGCGACTGAA GGATTACGCA
GGACGAGGCG TCGTTACAAC CTCGACCTAC GAGGCGCGCG CCTCTGGCGT CTTCTCGGCG
ATGGGCATGA TGAAGGCCGC GCAGCTCGCG CCCGACGCCA TCCTCCTGCC CACCGACTTC
GATTCCTACC GCCACTACTC GCGCCTCTTC AAGATTGAAG TAGCGAAGTT CACGACACGT
ATCGAAGACC GCGGCATCGA CGAGATCTAT ATCGACCTCA CCGACGTGCC CGGCGATGCC
GCCAACATCG GCTCGCGCAT CAAGGAGGCA GTCCGCGCCG CGACGGGCCT GACGTGTTCG
ATCTGCGTCG CCCCGAACAA ACTGCTCGCC AAGATCGGCT CAGAACTCGA CAAGCCCGAC
GGCCTGACCA TACTGACGCC CGAGGACATC CCCTCGCGCA TCTGGCCGTT GGCCGCCCGC
AAGATCAATG GCATCGGCCC GAAAGCGAGC GAGCGGCTGG CCACGCTCGG CATCAACACG
GTCGGCGATC TGGCGCACGC CGCGCCCGAT CTGCTGCAGT CCAACTTCGG CCTCAAGTAC
GCGACGTGGC TCACGCATGT CGCGCGGGGC ATCGACGAGC GCCCCGTGGT AGTCGAATCG
GAGCCGAAGT CGATGAGCCG CGAGACGACC TTCGAACGCG ACCTGCATCC GCGCCATGAC
CGGCCCGCGC TGTCGGAGTC GTTCACGCGG CTATGCGTGC GCGTTGCCGA AGACTTGCAG
CGCAAGGGCT ACGTCGGGCA CACGATCGGC ATCAAGCTGC GCTTCGACGA CTTCTCCACG
GTGACCCGCG ACCTGACGCT GCCCGTCGCG ACATCGGATG CGGGTGCGAT CCGGCGCGCG
GCGACCGAAT GTCTGAAGCG CGTCGCGCTG ACGCGCAAGC TGCGGCTGCT TGGCGTGCGC
GTCAGCGGTT TGTCGCTGGC AAGCGAGCAG GCGCCGCCGC TGCCGATCCA GGCCGAATTG
CCGTTCACGG CTTGA
 
Protein sequence
MSVTVRRIAH LDMDAFYASV ELLRYPELRG MPVVIGGGRN AAPETLADGT RRFARLKDYA 
GRGVVTTSTY EARASGVFSA MGMMKAAQLA PDAILLPTDF DSYRHYSRLF KIEVAKFTTR
IEDRGIDEIY IDLTDVPGDA ANIGSRIKEA VRAATGLTCS ICVAPNKLLA KIGSELDKPD
GLTILTPEDI PSRIWPLAAR KINGIGPKAS ERLATLGINT VGDLAHAAPD LLQSNFGLKY
ATWLTHVARG IDERPVVVES EPKSMSRETT FERDLHPRHD RPALSESFTR LCVRVAEDLQ
RKGYVGHTIG IKLRFDDFST VTRDLTLPVA TSDAGAIRRA ATECLKRVAL TRKLRLLGVR
VSGLSLASEQ APPLPIQAEL PFTA