Gene Bphy_3117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_3117 
Symbol 
ID6244808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp11487 
End bp12611 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content66% 
IMG OID642594919 
Productheat shock protein DnaJ domain-containing protein 
Protein accessionYP_001859331 
Protein GI186471989 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.779943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.291751 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGATTC ACAGCCACTA CGACAATCTG AAAGTTTCGC GGGATGCGCC TCAAGAGGTG 
ATCCGCGCGG CCTACAAGAT CTTGTGTCAG AAATATCATC CTGACCGGCG GATCGACGAT
CCCGATGCCG AGCGGGTGAT GAAGATCATC AACGCGTCCT ATGCGGTGCT GAGCGATCCC
GTGCAACGCA AGGAGCACGA CGAATGGCTC GCGCGCAAGG AACGCGAAGC GGCAGCAGCG
GCTGCCGTCC CGGCGCAGTC AAAGAGCCCG CAGACAACCC GGCGGACGAA CTCGCAAACA
GCTACCCAGA CGAAACGCGA GGCTTCGCCG CGTCGGCAGC CCCGCTCGAG CGCCTGGACC
TCGCAGGCGC GCGTCGATCC GCGTGCCGCG CCGTCGAGGC CCGCGGCGGC GGGGTTTTCA
CTGCGCAAGA TTTCGCTGCG CAGCTGGATC GCAATCGGCC TCTGTGCATT CTTCGGTTAC
GTCGCGATCT CGGAGTCGAT GACGCCGTGG CCGTTCACGC GCAACACGTC GAGCTCGTAC
GGTTCGCACT ATGGCTCGCC GTACGGGTCA CGCGATCAGG GAGGAGCCGA CGGCGCGACA
TCAGCCGAAG GCAAGCGGCG CGCGCTCGCC ACGCTGTCGT CGGCGCAGGC GGCGACGTCG
CCGTGGACGA ACGATGCCTC CGCTGGCGGC GATGCGTCGT CTGCACGGCC GGCGTTCGCG
AGGCCGGCCG TCGCGCCGAA CGGCCTGCCG TGGCCGTCAA CGGCGGCTTA CCTCGAAGGC
ATGCCAGTCG GTGCGGACGG GGGACATTCG TCCGTCACGA TCGACAACAC GCCCAACCGC
TTCGATGTGT TCGCGAAGCT CGTCTTCAAT GCGTCCGTGT TCGACCAGCC GGTGCGCCAC
TTCTACATTC CGGCGGGCAA GAGCTTCACG CTGCTCGGCG TCGCGCCCGG CAGCTACGAC
GTCCGCTATC AGAACCTCGA CGACGGCGGC CTGTACAAGT CGCAAAACTT CGCCGTCACC
GAACAGGACA GCGGCAACGG CATCGACGCG ACCAACGTGA GCATCACGCT CTACGCGGTG
CCTGGCACCG TGCAGCCGAC GACGATCGGC CGCGGCGACT TCTGA
 
Protein sequence
MKIHSHYDNL KVSRDAPQEV IRAAYKILCQ KYHPDRRIDD PDAERVMKII NASYAVLSDP 
VQRKEHDEWL ARKEREAAAA AAVPAQSKSP QTTRRTNSQT ATQTKREASP RRQPRSSAWT
SQARVDPRAA PSRPAAAGFS LRKISLRSWI AIGLCAFFGY VAISESMTPW PFTRNTSSSY
GSHYGSPYGS RDQGGADGAT SAEGKRRALA TLSSAQAATS PWTNDASAGG DASSARPAFA
RPAVAPNGLP WPSTAAYLEG MPVGADGGHS SVTIDNTPNR FDVFAKLVFN ASVFDQPVRH
FYIPAGKSFT LLGVAPGSYD VRYQNLDDGG LYKSQNFAVT EQDSGNGIDA TNVSITLYAV
PGTVQPTTIG RGDF