Gene Bphy_3108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_3108 
Symbol 
ID6244799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp4050 
End bp4988 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content67% 
IMG OID642594910 
ProductLysR family transcriptional regulator 
Protein accessionYP_001859322 
Protein GI186471980 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.12734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.186906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTTC GCCTGCCGCC GCTGAATTCA CTGCGTTTCT TCGAGGCGGC CGCGCGGCTC 
GGCAGCTTCA AGCTCGCCGC CGCCGAGCTC AATGTCACGC CCAGCGCGGT GAGTCACGGC
ATCGTCGCGC TCGAAGAGAC GCTCGGCGTC GCGCTGTTCG TGCGCGAGCC CCGCAAGCTG
TCGTTGACGC CTGCGGGCGA ACTGTATTTT CCCTATATTG CCGAAGCGTT TTCGCTGATC
CTCACGGGCA CCCAGCGCCT GCCCGATGGC CGAACGCATC GCACGATCTC GGTGAGCTGT
GCGCCGACAC TCGCCGCGCG CTGGCTCGTG CCGCGCCTGC ACGACTTTCG CGCGCAGTGG
CCGAACCTCG ACGTGTCCGT CGATACATCG CGCCGTCAGG TAGGCTTCCC CGTCGACGGC
TTCGATTTCG GCATCCGCCT GAGCCGCGGC CCCGTGCCCG GCAGCGACTG GAACCGGCTG
TTCGGCGAGA AGCTCGTGCC CGTGTGCAGT CCCGCGTGCC GGGAGACACT GGTCGACGCG
CACGGCGAAG TCGACTTGCG CCGCGCGACG CTGATTCACG TCGATACCGC GAGCGACGAC
TGGCAGACGT GGCTCGACGG CGCGGGCATC CGCAATATCG ACGCGACGGG CGGCCTGCGC
TTCGACACGA TCCAGCTTGC GCTCGAAGCG GCGACGACAG GCATGGGCGT CGCGGTCGGC
AGACGGCCGC TCGTGAACCG CGAGCTCGAT GCCGGCATGC TCGTCAAAGC GAGCACGTTA
AGCGTCGATG CAAAAACGTC CTACTGGCTC GTTTGCTCGG AACGCGCGGA CGAGCGTCCC
GAGTTGCAGG CATTCAAGCG CTGGTTGTTG CACGAAGCGC TCGCATTCGA AGCCCTGTCC
ACGCATGACG TCACCGCGTG CGCTGCGGCC ATGCGCTAG
 
Protein sequence
MPLRLPPLNS LRFFEAAARL GSFKLAAAEL NVTPSAVSHG IVALEETLGV ALFVREPRKL 
SLTPAGELYF PYIAEAFSLI LTGTQRLPDG RTHRTISVSC APTLAARWLV PRLHDFRAQW
PNLDVSVDTS RRQVGFPVDG FDFGIRLSRG PVPGSDWNRL FGEKLVPVCS PACRETLVDA
HGEVDLRRAT LIHVDTASDD WQTWLDGAGI RNIDATGGLR FDTIQLALEA ATTGMGVAVG
RRPLVNRELD AGMLVKASTL SVDAKTSYWL VCSERADERP ELQAFKRWLL HEALAFEALS
THDVTACAAA MR