Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_3108 |
Symbol | |
ID | 6244799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | + |
Start bp | 4050 |
End bp | 4988 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642594910 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001859322 |
Protein GI | 186471980 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.12734 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.186906 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCTTC GCCTGCCGCC GCTGAATTCA CTGCGTTTCT TCGAGGCGGC CGCGCGGCTC GGCAGCTTCA AGCTCGCCGC CGCCGAGCTC AATGTCACGC CCAGCGCGGT GAGTCACGGC ATCGTCGCGC TCGAAGAGAC GCTCGGCGTC GCGCTGTTCG TGCGCGAGCC CCGCAAGCTG TCGTTGACGC CTGCGGGCGA ACTGTATTTT CCCTATATTG CCGAAGCGTT TTCGCTGATC CTCACGGGCA CCCAGCGCCT GCCCGATGGC CGAACGCATC GCACGATCTC GGTGAGCTGT GCGCCGACAC TCGCCGCGCG CTGGCTCGTG CCGCGCCTGC ACGACTTTCG CGCGCAGTGG CCGAACCTCG ACGTGTCCGT CGATACATCG CGCCGTCAGG TAGGCTTCCC CGTCGACGGC TTCGATTTCG GCATCCGCCT GAGCCGCGGC CCCGTGCCCG GCAGCGACTG GAACCGGCTG TTCGGCGAGA AGCTCGTGCC CGTGTGCAGT CCCGCGTGCC GGGAGACACT GGTCGACGCG CACGGCGAAG TCGACTTGCG CCGCGCGACG CTGATTCACG TCGATACCGC GAGCGACGAC TGGCAGACGT GGCTCGACGG CGCGGGCATC CGCAATATCG ACGCGACGGG CGGCCTGCGC TTCGACACGA TCCAGCTTGC GCTCGAAGCG GCGACGACAG GCATGGGCGT CGCGGTCGGC AGACGGCCGC TCGTGAACCG CGAGCTCGAT GCCGGCATGC TCGTCAAAGC GAGCACGTTA AGCGTCGATG CAAAAACGTC CTACTGGCTC GTTTGCTCGG AACGCGCGGA CGAGCGTCCC GAGTTGCAGG CATTCAAGCG CTGGTTGTTG CACGAAGCGC TCGCATTCGA AGCCCTGTCC ACGCATGACG TCACCGCGTG CGCTGCGGCC ATGCGCTAG
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Protein sequence | MPLRLPPLNS LRFFEAAARL GSFKLAAAEL NVTPSAVSHG IVALEETLGV ALFVREPRKL SLTPAGELYF PYIAEAFSLI LTGTQRLPDG RTHRTISVSC APTLAARWLV PRLHDFRAQW PNLDVSVDTS RRQVGFPVDG FDFGIRLSRG PVPGSDWNRL FGEKLVPVCS PACRETLVDA HGEVDLRRAT LIHVDTASDD WQTWLDGAGI RNIDATGGLR FDTIQLALEA ATTGMGVAVG RRPLVNRELD AGMLVKASTL SVDAKTSYWL VCSERADERP ELQAFKRWLL HEALAFEALS THDVTACAAA MR
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