| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3098 |
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| Symbol | |
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| ID | 6244577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 3476508 |
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| End bp | 3478160 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642594900 |
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| Product | putative inner membrane protein translocase component YidC |
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| Protein accession | YP_001859312 |
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| Protein GI | 186477842 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0000113724 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATATCA AACGCACCGT CCTATGGGTC ATTTTCTTCA TGTCAGCTGT CATGCTGTTC
GACAACTGGC AGCGCGACCA CGGACGCCCG TCGATGTTCT TCCCGAGCGC GACGCAGACC
AAGACGGCGG CTCCCGCCGC GCCCGGCTCG TCGACGACGG CAAGCCAACC GACAGATTTG
CCGCAGACGA CGGCTGCCGC ACCCGGCTCG ACAACGCCCG CCGCGCAGCA GGCGCAGCTG
GTTTCGTTCA GCACGGACGT CTACCGTGGC CAGATCGATA CGCGGGGCGG CACGCTGTCC
AAGCTCACGC TGGTCAAGCC GGGGGAGGGC AAGCAGCCCG ATCAGGTGAT CACGCTGTTC
GACCACACGG CCGACCACAC GTATCTCGCG CGTACGGGCC TGCTCGGCGG CGACTTCCCG
AACCACACCG ACGTGTTCAC GCCCGTTGCC GGTCAGGCGA CCGACATGAC GGGCAACACA
CTGACGCTAT CTTTCCAGTC GCCGGAAAAG GGTGGCCTGA AGGTCGTGAA GACATACACC
TTCACGCGTG GCAGCTATGT GATCAATGTC GATACGAAAA TCCAGAACGT CGGCACGGCG
CCCGTCAAGC CGACCGCGTA CATGGAACTC GTGCGCGACA GTCAGCCCGT CGAAACGCCG
CGCTTCTCGC ACACGTTCAT CGGGCCGGCG GTGTACACGG AACAGCATCA CTTCCAGAAG
CTGACGTTCG GCGACATCGA CAAGAACAAG CAGGACTATG CCACTTCGGC CGACAACGGC
TGGGTCGCGA TGGTGCAGCA CTATTTTGCA TCTGCGTGGA TTCCGCAGCA GGGCGCAAAG
CGTGACATCT ACGTCGAGAA GATCGATCCG TCGCTCTATC GCGTCGGCGT CAAGCAGCCG
TTGCAGACCA TTGCGCCGGG CCAGACGATC GACGTGTCTG CGCGTCTGTT CGCCGGTCCG
GAAGAAGAAC GCATGCTCGA AGGCATCGCG CCGGGTCTGG AACTGGTGAA GGACTACGGC
TGGGTGACGA TCATCGCGAA GCCGCTGTTC TGGCTGCTCG AAAAGATCCA CGGCTACGTC
GGCAACTGGG GCTGGGCAAT CGTGCTGTTG ACGCTGCTGA TCAAGGCCGT GTTCTTCCCG
CTGTCGGCAG CTAGCTACAA GTCGATGGCC CGCATGAAGG AAATCACGCC GCGCATGCAG
GCGCTGCGCG AACGCTTCAA GAGCGATCCG CAGAAGATGA ACGCGGCTCT GATGGAGCTG
TACAAGACTG AGAAGGTCAA TCCGTTCGGC GGCTGCCTGC CTGTCGTGAT TCAGATTCCG
GTCTTTATCT CGCTGTACTG GGTGCTGCTT TCGTCGGTGG AAATGCGCGG TGCACCGTGG
ATTCTGTGGA TTCACGATCT GTCGCAACAA GATCCGTACT TCATCCTGCC GGTTCTGATG
GCCGTCTCGA TGTTCGTTCA AACGAAGCTC AACCCGACGC CGCCGGATCC TGTGCAAGCC
AAGATGATGA TGTTCATGCC GATCGCGTTC TCGGTCATGT TCTTCTTCTT CCCGGCCGGT
CTTGTGCTGT ACTACGTCGT GAACAATGTG CTGTCGATTG CGCAGCAGTA TTACATCACG
CGCATGATGG GGCAGAAGAA AAAGGCTGCC TGA
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| Protein sequence | MDIKRTVLWV IFFMSAVMLF DNWQRDHGRP SMFFPSATQT KTAAPAAPGS STTASQPTDL
PQTTAAAPGS TTPAAQQAQL VSFSTDVYRG QIDTRGGTLS KLTLVKPGEG KQPDQVITLF
DHTADHTYLA RTGLLGGDFP NHTDVFTPVA GQATDMTGNT LTLSFQSPEK GGLKVVKTYT
FTRGSYVINV DTKIQNVGTA PVKPTAYMEL VRDSQPVETP RFSHTFIGPA VYTEQHHFQK
LTFGDIDKNK QDYATSADNG WVAMVQHYFA SAWIPQQGAK RDIYVEKIDP SLYRVGVKQP
LQTIAPGQTI DVSARLFAGP EEERMLEGIA PGLELVKDYG WVTIIAKPLF WLLEKIHGYV
GNWGWAIVLL TLLIKAVFFP LSAASYKSMA RMKEITPRMQ ALRERFKSDP QKMNAALMEL
YKTEKVNPFG GCLPVVIQIP VFISLYWVLL SSVEMRGAPW ILWIHDLSQQ DPYFILPVLM
AVSMFVQTKL NPTPPDPVQA KMMMFMPIAF SVMFFFFPAG LVLYYVVNNV LSIAQQYYIT
RMMGQKKKAA
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