| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3082 |
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| Symbol | |
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| ID | 6244561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 3460615 |
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| End bp | 3462225 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642594884 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001859296 |
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| Protein GI | 186477826 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000000116407 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGTTTG ATCGAACTTC GCGCGCGCGC GCCGCTGTCG CGAACGTCGC GGGTCCACGC
GTCCTGAGCA TCGCCGCTTG CGCCGCGCTC GCCTTCGCAC TTTCCGGCTG CGCCGTCGGC
CCCGACTACA AGCGCCCGTC CGTCGACATT CCGGCTTCGT ACAAAGAAGC CGCCGACGGC
TGGAAAGTCG CACAGCCCGC CGACCAGCAC GACCGCGGCG CTTGGTGGTC GATCTACAAC
GATGCGCAGT TGAACGCGCT CGAAGAGAAG CTCAACGCAT CGAACCAGAG CATCGCGCAG
TTCGCCGCCG CGTATCGGCA GGCGCGCGCG CTGGTCGGCG AAGCGCGCGC GGCGTATTTC
CCGGTGATCA GTGCATCGGC GGACGCGTCC CGCTCGCGCA CGCCGAGCCG CAGCTTTAGT
GGCTCCGTGA CAGGCGGAGG CGGCGGAACC ACGTCGTCGC TGAGCAGTTC GGGCTCGATC
AGCAACAGCT ACAGCCTGTC GCTCGACGCC ACCTGGGAAC CCGACCTGTG GGGCAAGGTG
AGCCGCACCG TCGCCGGTCA GCAGGCTGGC CAGCAGTCGG CCGCCGCCGA TCTGGCGAAC
GCGCGCCTGT CCGCTCAAGC GACGCTCGCG CAAACCTACT TCAACACCCG TTCGCTTGAC
GCCCAGCAAA AGCTGCTCGA CGACACCGTC GCCGCATACC AGCGCTCGCT CACCCTCACG
CAGAACCGCT ATGCGCAGGG CGTCGCGGCG CGCTCCGACG TGATCCAGGC GCAAACCCAG
CTGCAGTCGG CGCAGGCCGC CGCCATCGAT AACGGGGTCG CGCGCGCGCA GAACGAACAT
GCGATCGCCG TGCTCGTCGG CCAGCCGGCG TCTACCTTCT CGCTGCCGCC CGCGCCGCTC
GATGCCGTGC CGCCCGTCGT GCCCGCACAA CTGCCGTCCG CGCTGCTCGA ACGGCGCCCC
GACATCGCGT CTGCCGAACG CAAGGCTGCC GCGGCGAACG AGCAGATCGG CATCGCGATT
GCCGCGTTCT TCCCCACGCT CACGCTGTCT GCGAGCGGCG GCTTCGAAAG CTCGGTGTTC
TCGCAATTGC TGCAGATGCC GTCGCGTTTC TGGACGCTAG GGCCGCAACT CGCGGGCACG
ATCTTCGATG CAGGTTTGCG CAAGGCGCAG ACGGACGCCG CGCGTGCCAC CTACGACCAG
GACGTCGCCA CCTATCGGCA AACGGTGCTG ACAGCTTTCC AGGACGTGGA AGACAACCTG
TCGTCGCTGC GCATTCTCGA GCAGGAAATC ACGGTGCAAC AACAGGCCGT CCAGTCTGCG
CAGCAGGCGC TCGATATCGT CACGAACCAG TACAAGTCCG GCACCGTGGA TTACCTGAAC
GTGCTGACCG CGCAGACCAC GGCATTCACC GCGCAGCAGA AGCTCGCGAG CATCGCGGGT
CAGCGGATGG TGTCGTCGGT GGGGCTCGTC AAGGCGCTCG GCGGCGGCTG GGATGCGTCG
CAGATGAACC GCGAGACGGG CGATATCGCG GCGCCCGCGC CGGCTTCCGA ACCCGCGGCG
CCCGTCACAC CCGCCACGCC CGTCACGAAA GCATCCGCCG CGGCACGCTG A
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| Protein sequence | MQFDRTSRAR AAVANVAGPR VLSIAACAAL AFALSGCAVG PDYKRPSVDI PASYKEAADG
WKVAQPADQH DRGAWWSIYN DAQLNALEEK LNASNQSIAQ FAAAYRQARA LVGEARAAYF
PVISASADAS RSRTPSRSFS GSVTGGGGGT TSSLSSSGSI SNSYSLSLDA TWEPDLWGKV
SRTVAGQQAG QQSAAADLAN ARLSAQATLA QTYFNTRSLD AQQKLLDDTV AAYQRSLTLT
QNRYAQGVAA RSDVIQAQTQ LQSAQAAAID NGVARAQNEH AIAVLVGQPA STFSLPPAPL
DAVPPVVPAQ LPSALLERRP DIASAERKAA AANEQIGIAI AAFFPTLTLS ASGGFESSVF
SQLLQMPSRF WTLGPQLAGT IFDAGLRKAQ TDAARATYDQ DVATYRQTVL TAFQDVEDNL
SSLRILEQEI TVQQQAVQSA QQALDIVTNQ YKSGTVDYLN VLTAQTTAFT AQQKLASIAG
QRMVSSVGLV KALGGGWDAS QMNRETGDIA APAPASEPAA PVTPATPVTK ASAAAR
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