Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_3077 |
Symbol | |
ID | 6244556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 3456005 |
End bp | 3456709 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642594879 |
Product | putative general secretory pathway protein J |
Protein accession | YP_001859291 |
Protein GI | 186477821 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4795] Type II secretory pathway, component PulJ |
TIGRFAM ID | [TIGR01711] general secretion pathway protein J [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.000000785542 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAACGAA TCGCTCGCTC TGAGCACGAG GTGCCCCGCG GCCGCCGTTC GCTGCTATCG AGAAAGACAG CGAGCGGCTT CACGCTGATC GAGCTGCTCG TCGCGATTGC GATTCTGGCC GTGATCGCGG TCCTGTCGTG GCGCGGACTG GATCAGATCA TTCGCGGACG GCAGACGATC ACGAACGCGA TGGAAGACGA GCGCGTGTTC GCTCAGTTCT TCGATCAGAT GCGCATCGAC GTGCGCAATG CCGCGTCCGA CGACGAAGCG GGCGAGCCCG CCGTCGCTGT GAACGGCAAT GCGCTGCAGA TCGTGCGCTA CATGCGCACG CCGGGTGCGC CGCCGCGTCT CGTGGTGGTG CGGTATCGGA TCATCGAAGG ACGCATCATT CGCTATGCGT CGCCACCGCT GGCGAACATC GGCGACGTGC GCCGCGCGCT CGGCGGGTCG GAAAGCGGAG ACTGGAACGC CGTGCCTTTG ATGGGCGGTG TGGGCGCGAT TTCCGCGCGC CTGTATGTGC CGAAAGTCGG CTGGACGACG CAGATGAAAG ACGTGCAAGC GGCGATCGCG GAGAACGACA ATAACCTGAA GGTGCCTCAG CTCGGCAATG CGCCGTTGCC GAGGTCGGTA ACGGGGCTCG AGGTGAGCAT TGGCGCGAAT TCGCTCGCGC GGCCCGTGAC GCGGGTTTTT CTCGTGGGAG AGTGA
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Protein sequence | MKRIARSEHE VPRGRRSLLS RKTASGFTLI ELLVAIAILA VIAVLSWRGL DQIIRGRQTI TNAMEDERVF AQFFDQMRID VRNAASDDEA GEPAVAVNGN ALQIVRYMRT PGAPPRLVVV RYRIIEGRII RYASPPLANI GDVRRALGGS ESGDWNAVPL MGGVGAISAR LYVPKVGWTT QMKDVQAAIA ENDNNLKVPQ LGNAPLPRSV TGLEVSIGAN SLARPVTRVF LVGE
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