| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3072 |
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| Symbol | |
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| ID | 6244551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 3452595 |
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| End bp | 3453812 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642594874 |
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| Product | general secretion pathway protein F |
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| Protein accession | YP_001859286 |
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| Protein GI | 186477816 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0000734436 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGGCAT TCCGCTTCGA AGCGATCGAC GCCGCAGGCA AGGCGCAAAA AGGCGTACTC
GATGCTGACA GCGCGCGCGG CGCGCGTACG CAGTTGCGCG GGCAAGGTCT CACGCCGCTC
GTCGTCGAAC CTGCGGCGAC GCGCACACGC GGCGAACGCA GCCAGCGTCT TTCGCTGGGA
CGCAAACTGT CGCAACGAGA GCAGGCGATT CTCACGCGGC AGCTTGCCAG TCTGCTGATC
GCCGGCCTGC CGCTCGACGA AGCGCTCTCC GTGCTCACCG AGCAATCCGA GCGTGATTAC
ATCCGTGAAC TGATGGCCGC GATCCGCGCG GAAGTGCTGG GCGGTCATTC GCTCGCGAAT
GCGCTGTCGC AGCATCCGAA AGACTTCCCC GACATCTACC GCGCGCTCGT CGCGGCGGGC
GAGCATACGG GCAAGCTCGG TCTCGTGCTG TCCCGTCTTG CTGACTACAT CGAGCAACGT
AATGCGCTCA AGCAAAAGAT CATTCTCGCG TTCACGTATC CGACCATCGT TACGATCATC
GCCTTTGGCA TCGTCACGTT CCTGCTGAGC TATGTGGTGC CGCAGGTCGT CAACGTGTTC
GCGAGCACGA AGCAGCAACT GCCGTTTCTC ACCATCATGA TGATGGCGCT CTCCGGCTTC
GTACGGAATT ACTGGTGGGC GATGCTGATC GCCGTGGTGA TTGTCGTGTA TGTGGTGCGC
TCGATACTCG CTCAGCCTGG CCCGCGGCTT GCGTTCGACC GCTGGACGCT GACAGCCCCC
CTCTTCGGCA AGCTCGTGCG CGGCTACAAC ACCGTGCGCT TTGCGAGCAC GCTGGGCATC
CTGACGGCGG CGGGCGTGCC GATTCTGCGC GCGCTGCAGG CCGCAAGCGA AACGCTCAGC
AACCGCGCGA TGCGAGACAA CATCGACGAT GCCATCGTGC GCGTGCGCGA AGGCACGTCG
CTGTCGCGTG CGCTCGGCAA CACGAAGACG TTTCCGCCCG TGCTCGTGCA CCTGATCCGT
TCGGGCGAAG CAACGGGCGA CGTGACGACG ATGCTCGACC GCGCGGCCGA AGGTGAAGCG
CGTGAGCTGG AGCGGCGCAC GATGTTTCTG ACGAGTTTGC TGGAACCGCT GCTGATTCTG
GCGATGGGCG GCGTGGTGCT GGTGATCGTG CTAGCCGTGA TGCTGCCGAT CATCGAGCTG
AACAACCTGG TGCAGTGA
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| Protein sequence | MPAFRFEAID AAGKAQKGVL DADSARGART QLRGQGLTPL VVEPAATRTR GERSQRLSLG
RKLSQREQAI LTRQLASLLI AGLPLDEALS VLTEQSERDY IRELMAAIRA EVLGGHSLAN
ALSQHPKDFP DIYRALVAAG EHTGKLGLVL SRLADYIEQR NALKQKIILA FTYPTIVTII
AFGIVTFLLS YVVPQVVNVF ASTKQQLPFL TIMMMALSGF VRNYWWAMLI AVVIVVYVVR
SILAQPGPRL AFDRWTLTAP LFGKLVRGYN TVRFASTLGI LTAAGVPILR ALQAASETLS
NRAMRDNIDD AIVRVREGTS LSRALGNTKT FPPVLVHLIR SGEATGDVTT MLDRAAEGEA
RELERRTMFL TSLLEPLLIL AMGGVVLVIV LAVMLPIIEL NNLVQ
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