Gene Bphy_3042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_3042 
Symbol 
ID6244523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp3416967 
End bp3418022 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content64% 
IMG OID642594846 
Productinner-membrane translocator 
Protein accessionYP_001859258 
Protein GI186477788 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTAT CAATTGCGGC GATCCTCGCG CAGGACGGCA TTACGACCGG CGCAATCTAC 
GCGTTGCTTG CGCTCGCGCT GGTGCTGGTG TTCTCCGTGA CGCGCGCCAT TTTTATCCCG
CAAGGGGAGT TTGTCTCCTA CGGCGCGTTG ACGCTCGCCG CATTGCAGAC GCAAAAATTC
CCAGCGACGT GCTGGCTGCT AATGGCGATG GGGCTGGCGT GCTTCGTGGT CGAGATGATC
GGGATGGCGC GCCATGCTGA GAGGCGGCGG CATGCGGCGC GCACGCTGGT GACGCTGGTC
GGCAAGTACC TGCTGTTTCC GGTTGCCGTT TATGCCGTCA CGCGCGGCGT ATTCATGCAG
CCGCTGCCGA TGATCGCGCA GATCGCGCTG ACGCTGCTGA TCGTCGTGCC CATGGGACCG
TTCGTCTATC GCCTCGCGTA CGAGCCGGTT GCTGAAGCGA CGACGCTTCT GCTGCTGATC
GTGTCCGTGG CTGTGCACTT CGCGATGGTC GGCCTGGGGC TCGTGATGTT CGGCGCGGAA
GGTTCGCGCA CCAACGCCTT CACCGACTCC ACGTTCAACA TCGGCACCCT GTCGATCTCG
GGGCAGAGCG TGTGGGTGAT CGGCGTGGCC GTGGTGCTGA TCGGCGTGCT GTACGTGTAT
TTCGACCGCT CGATCTCCGG CAAGGCGCTG CGTGCCACGT CCGTGAACCG GCTCGGCGCA
CGGTTGGTCG GTATCGGCAC CACGCAGGCG GGGCGGCTCG CGTTCACGCT CGCGGCCGGT
CTCGGCGTGC TGTGCGGGAT TCTCGTCGCG CCGCTGACGA CCATCTATTA CGACTCGGGC
TTCCTGATCG GTCTCAAGGG CTTTGTCGGC GCGATTATCG GCGGGCTGGT CAGCTATCCG
CTGGCTGCCG CAGGTTCGAT ACTCGTCGGC CTGCTGGAGT CATATTCGTC GTTTTGGGCC
AGTTCGTACA AGGAAGTGAT CGTGTTCACG CTGATCATCC CGGTGCTGCT CTGGCGGAGT
CTCGCCAGCC CGCACACGGA AGAAGAGGAG GAGTGA
 
Protein sequence
MDLSIAAILA QDGITTGAIY ALLALALVLV FSVTRAIFIP QGEFVSYGAL TLAALQTQKF 
PATCWLLMAM GLACFVVEMI GMARHAERRR HAARTLVTLV GKYLLFPVAV YAVTRGVFMQ
PLPMIAQIAL TLLIVVPMGP FVYRLAYEPV AEATTLLLLI VSVAVHFAMV GLGLVMFGAE
GSRTNAFTDS TFNIGTLSIS GQSVWVIGVA VVLIGVLYVY FDRSISGKAL RATSVNRLGA
RLVGIGTTQA GRLAFTLAAG LGVLCGILVA PLTTIYYDSG FLIGLKGFVG AIIGGLVSYP
LAAAGSILVG LLESYSSFWA SSYKEVIVFT LIIPVLLWRS LASPHTEEEE E