Gene Bphy_3022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_3022 
Symbol 
ID6244503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp3393280 
End bp3395538 
Gene Length2259 bp 
Protein Length752 aa 
Translation table11 
GC content67% 
IMG OID642594826 
Productprimosome assembly protein PriA 
Protein accessionYP_001859238 
Protein GI186477768 
COG category[L] Replication, recombination and repair 
COG ID[COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase 
TIGRFAM ID[TIGR00595] primosomal protein N' 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCTCG AAGCGCTGAC CGACACCTTC GTCCGCGTTG CGCTCGATCA TCCGTTGCCG 
ACGCTTTTCG ACTACCGCTG CGACGGCGCC TGGGCGCCGG CGCCGGGCAT GCTCGTCAGC
GTGCCATTCG GCAAGCGGCA TATCGTGGGG CTCGTCATGG AAGTGACCGC TTACAGCGAC
GTGCCTGCCG ATCGCATCAA ATCGGTCCAC AGCGTCTGCA CCGCGTGCCC GCCGCTGTCG
GAGCATTGGC TGCAACTCGC GCAATTCGCC GCCGACTATT ACCAGCGCGG CATCGGTGAA
GTCGCGCTGC CCGCGCTTCC GCAGGCGCTG CGTGATGCGC CGCGCTGGAC GCGCCTGCTC
GCGCCCGAGG AACGCTATCG CCTGCTGCCT GCGGGCCGCG CGGCGTTGCC CGGCGCGTTG
CCTGCCCGCG CTACCGCGCT GCGCCGTCTT GCAGCCGCGC TGGCTGAAGC GGAGTCGCTG
CCAGCCGTCG ATGCGCGCGC GCTGCATCCC AAGGCCACCG CGACGCTGGA AGCGTGGCAA
GCCGAAGGCT GGGTCGCGCT TGACGTGCTC GATCCCGCAG CGCCACGTCC AGCGCAGGAT
CACACGCCGC AAAGCGTGTC GCTGCCGACA CTCACGGACG AACAGACGAC CGCGGTCGAA
GCGATCCGCG ACGTGCAAGG CTTCGCGCCG TTTCTGCTGC ACGGCGTAAC GGGCAGCGGC
AAGACGGAGG TGTATCTGCG CGCGTTGGCT GGCTTGCTGG CCGCTAATCC CAACGCGCAA
GCGCTCGTAC TCGTGCCCGA GATCAACCTG ACGCCGCAGT TCGAAGCGGC GTTTCGAGCA
CGTTTCGCGT CGATGGACGA TGCCGAAATC GTCACGCTGC ATAGCGGTCT GGCCGAAGGC
GAACGCGCCC GCAACTGGTT CGCCGCGCAC ACGGGACGCG CGCGCATCGT GCTGGGTACG
CGGCTCGCGG TGCTGGCGTC GTTGCCGCAT CTCGCCATGA TCGTCGTCGA CGAGGAGCAC
GATCCCGCTT ACAAGCAGCA GGAAGGTCTG CGCTATTCCG CGCGCGATCT GGCGATCTGG
CGGGCGAAAC AGCTCGCCAT TCCCGTCGTT TTGGGATCGG CGACGCCTTC GCTCGAAAGC
TGGTGGCAGG TCGATCAGGG ACGCTACAGA CGGCTCACGT TGTCGCGCCG CGCCGTTGCG
GATGCCGTGT TGCCCACCGT CCGGCTCGTC GATCTGGAAG ATGAACGCAG GCGCGGGCGC
GCGTCGGTGG AAGGTCTGTC CGGGCCGCTG ATCGCGGCGC TAAAAACGCG TCTCGAGCGT
GGCGAACAAA GCCTCGTGTT CCTGAACCGT CGCGGCTACG CGCCGCAGCT GGCGTGCGAC
GCATGCGGCT GGGTCGCGGG CTGCCCGCGA TGCAGCGCCT ATGCGGTGCT GCATAAGCCG
GAACGGGCGC TGCGTTGCCA CCATTGCGGC TGGGAAGCAC GCATTCCACG CTCGTGTCCG
GAATGCGGCA ATGTCGATAT AGCGCCGCTC GGACGCGGCA CGCAGCGCAT CGAAGAGGCG
CTCGCCAGCG CGGTTCCGGG TGCGCGCGTG CTGCGCATCG ATGCCGACAG CACGCGCCGC
AAGGGCAGCG CGCAGGCGCT GTTCTCCGAC GTGCATGCGG GCGAAGTCGA CATTCTGGTC
GGCACTCAGA TGATCGCGAA GGGGCACGAT TTCCGTCGCG TGTCGCTGGT CGGCGTGCTG
AACGCGGACA CGGCGCTCTT TTCCCACGAT TTCCGCGCCA GCGAGCGCCT GTTCGCGCAA
CTGATGCAGG TAAGCGGCCG CGCAGGCCGC GCCGGATTAC CGGGTGAAGT GCTGGTGCAA
ACGCGTTACC CGACACACGC GCTGTATCAC GCGTTGGCTC GCCAGGATTA CGTTGGCTTT
GCCAATTCGA CCCTTTCCGA ACGGCGCGAC GCGCATCTGC CGCCCTTCGT CTATCAGGCG
ATGCTTCGCG CCGAAGGACG CACGCTCGAC GCCGCGCTCA CATTCCTGCA ACAGGCGGCA
ACGGCGTTGA CCGACATCCC CGCTGCGAGC CGCGTGACCG TGTACGACGC GGTACCGCTC
ACCATCGTCA AGGTGATGCA CGTGCATCGC GCGCAATTGC TGGTGGAGAG CGCGTCACGC
GCTGCGCTGC AGGCGACGCT GCGTGCGTGG CAGCCGCTGC TGCGCACGCT GAAAGGCGTG
CTGCGCTGGA GCATCGAAGT CGATCCGCTG GACATCTGA
 
Protein sequence
MRLEALTDTF VRVALDHPLP TLFDYRCDGA WAPAPGMLVS VPFGKRHIVG LVMEVTAYSD 
VPADRIKSVH SVCTACPPLS EHWLQLAQFA ADYYQRGIGE VALPALPQAL RDAPRWTRLL
APEERYRLLP AGRAALPGAL PARATALRRL AAALAEAESL PAVDARALHP KATATLEAWQ
AEGWVALDVL DPAAPRPAQD HTPQSVSLPT LTDEQTTAVE AIRDVQGFAP FLLHGVTGSG
KTEVYLRALA GLLAANPNAQ ALVLVPEINL TPQFEAAFRA RFASMDDAEI VTLHSGLAEG
ERARNWFAAH TGRARIVLGT RLAVLASLPH LAMIVVDEEH DPAYKQQEGL RYSARDLAIW
RAKQLAIPVV LGSATPSLES WWQVDQGRYR RLTLSRRAVA DAVLPTVRLV DLEDERRRGR
ASVEGLSGPL IAALKTRLER GEQSLVFLNR RGYAPQLACD ACGWVAGCPR CSAYAVLHKP
ERALRCHHCG WEARIPRSCP ECGNVDIAPL GRGTQRIEEA LASAVPGARV LRIDADSTRR
KGSAQALFSD VHAGEVDILV GTQMIAKGHD FRRVSLVGVL NADTALFSHD FRASERLFAQ
LMQVSGRAGR AGLPGEVLVQ TRYPTHALYH ALARQDYVGF ANSTLSERRD AHLPPFVYQA
MLRAEGRTLD AALTFLQQAA TALTDIPAAS RVTVYDAVPL TIVKVMHVHR AQLLVESASR
AALQATLRAW QPLLRTLKGV LRWSIEVDPL DI