Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_3018 |
Symbol | putA |
ID | 6244499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | - |
Start bp | 3386957 |
End bp | 3390919 |
Gene Length | 3963 bp |
Protein Length | 1320 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642594822 |
Product | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_001859234 |
Protein GI | 186477764 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAGCA CCACCCTTGG CGTAAAAGTC GACGACCTGC TGCGTACCCG GCTGAAAGAT GCCGCGACGC GCCTCGAGCG CACTCCCCAC TGGCTGATCA AGCAGGCGAT CTTCGCTTAC CTCGAGAAGA TCGAGCACGG CCAGCTTCCC GCCGAGCTGT CCGGGCATCA CGGCGCAACC GAACTGGCCG ATGGTGCCGC CGATCCGGAC GAAAGCGACG GACTGCATCC GTTCCTCGAA TTCGCGCAGA GCGTGCAGCC GCAGTCGGTG CTGCGTGCGG CGATCACGGC TGCGTATCGA CGGCCGGAGC CGGAATGCGT GCCGTTCCTG ATAGGCCAGG CGCGTCTGCC TGCGAATATC GCGAACGACG TGCAGGCCAT GGCGAGCAAG CTCGTCGAAG CACTGCGCTC GAAGAGCACG GGCGGCGGCG TCGAAGGGCT GATCCACGAG TTCTCGCTGT CGAGCCAGGA AGGTGTGGCG CTGATGTGTC TCGCGGAAGC GCTGCTGCGC ATTCCCGACC GCGCAACGCG CGACGCGCTG ATTCGCGACA AGATCAGCAA GGGCGACTGG CGTTCGCACG TCGGTCATGC ACCGTCGCTG TTCGTGAACG CGGCGACGTG GGGCCTGATG ATCACCGGCA AGCTGGTGAC GACGAATAGC GAAACGGGCC TGTCGTCGGC GCTCACGCGC ATGATCGGCA AGGGCGGCGA GCCGCTGATC CGCAAGGGCG TCGACATGGC GATGCGCCTG ATGGGCGAGC AGTTCGTGAC GGGTGAAACC ATCTCCGAAG CGCTCGCCAA CAGCCGCAAG TTCGAGGCAC GCGGCTTCCG CTACTCCTAC GACATGCTCG GCGAAGCCGC GACCACGGAA GCCGACGCGC AGCGCTACTA CGCATCGTAC GAGCAGGCGA TCCACGCGAT CGGCAAGGCG GCGGGCGGCC GCGGCATCTA CGAAGGCCCG GGCATTTCGA TCAAGCTGTC GGCGCTGCAT CCGCGTTACT CGCGTTCGCA GCAGGAACGC ACGATGAGCG AGCTGCTGCC GCGCGTGCGC GCGCTTGCGA TTCTCGCGCG CCGCTACGAC ATCGGCCTGA ACATCGACGC TGAAGAAGCG GACCGTCTGG AGATCTCGCT CGATCTGCTC GAAGCGCTGT GCTTCGACCC GGAGCTGCAA GGCTGGAATG GCATCGGCTT CGTCGTGCAG GCATATCAGA AGCGCTGTCC GTTCGTGATC GACTACATCG TCGACCTCGC GCGTCGCAGC CGCCACCGCA TCATGGTCCG TCTGGTGAAG GGCGCGTACT GGGATACGGA AATCAAGCGC GCGCAGGTGG ATGGCCTCGA AGGTTATCCC GTGTACACGC GCAAGATCTA TACGGACGTG TCGTACCTCG CGTGCGCGAA GAAGCTGCTC GGCGCACCGG ATGCCGTCTA TCCGCAGTTC GCGACGCACA ATGCGCACAC GCTGTCCGCG ATCTATCACC TGGCGGGCCA GAACTACTAC CCCGGCCAGT ACGAGTTCCA GTGCCTGCAC GGCATGGGTG AGCCGCTGTA CGAAGAAGTG ACGGGCCGCG ACAAGCTGAA TCGTCCGTGC CGCGTATATG CGCCCGTCGG CACCCATGAA ACGTTGCTCG CGTACCTTGT GCGCCGCCTG CTGGAAAACG GTGCGAACAC ATCATTCGTG AACCGCATCG CTGATGAAAC CGTGCCCGTG CAGGATCTCG TCGCCGATCC CGTCGATGAA GCTGCGAAGA TCGTGCCGCT CGGCGCGCCG CACGCGAAGA TTCCGCTGCC GCGCAATCTG TACGGCGCGG AGCGCACCAA TTCGATGGGC CTCGATCTGT CGAACGAGCA TCGCCTCGCG TCGCTGTCGT CGGCGCTGCT GGCTAGCGCG AATCATCCGT GGCGTGCCGC GCCGATGCTC GAAGGCAACG AGATCGCCGT CGGTCGTGCA CGGGACGTGC GTAACCCGTC GGATCACCGC GACCTCGTCG GCACGGTCGT CGAAGCGACG CCGGAACACG TGAGCGCCGC GCTCGCGCAT GCCGTCGCCG CTGCGCCCAT CTGGCAGGCG ACGCCTGTTG AAGCGCGTGC CGATTGCCTC GCGCGAGCCG CCGATCTGCT CGAAGCGCAG ATGCATACCC TGATGGGCCT CGTGGTGCGC GAAGCGGGCA AGTCGCTGCC GAACGCCGTC GCCGAAATTC GCGAAGCGAT CGACTTCCTG CGCTACTACT CGAGTCAGAT CCGCGACGAG TTCTCGAACG ACACGCATCG CCCCCTCGGT CCCGTCGTGT GTATCAGTCC GTGGAACTTC CCGCTGGCGA TCTTCATGGG TCAGGTAGCC GCGGCGCTCG CCGCAGGCAA CACGGTTTTG GCCAAGCCCG CCGAACAGAC GCCGCTGATC GCCGCGCAAG CCGTGCGCAT TCTGCGCGAA GCGGGTGTGC CCGCGGGCGC AGTGCAACTG CTGCCGGGCG ATGGCGAAAC GGTTGGCGCT GCGCTGGTCG CCGATGCACG CACGCGCGCC GTGATGTTCA CCGGCTCGAC GGAAGTCGCG CGTCTCATCA ACAAGACGCT TTCGAATCGC CTCGACCCTG ATGGCAAGCC GATTCCGCTG ATCGCCGAAA CGGGCGGCCA GAACGCGATG ATCGTCGATT CGTCGGCGCT CGCCGAACAG GTTGTGGCCG ACGTGCTGCA ATCGTCGTTC GATTCGGCCG GTCAACGTTG TTCCGCGCTG CGCGTTCTCT GTCTTCAGGA CGATGTCGCG GACCGCACGC TCGAAATGCT GACGGGCGCG ATGAAGGAAC TGGCGGTGGG CAATCCCGAC CGTCTGTCGA TCGACGTGGG TCCCGTGATC GACGCGGAAG CGAAGCGCGG TATCGACGCG CATATCGCCT CGATGCGCGA GAAGGGCCGC AAGGTCACAC AGATGCCGAT GCCGGATGGC TGTGCAGCCG GTACGTTCGT GCCGCCGACG CTGATCGAAC TCGACAACAT CGACGAACTG AAGCGTGAAG TGTTCGGCCC CGTGCTGCAC GTGGTGCGTT ACCGCCGCAG CGCGCTGGAC AAACTGCTCG AACAGATCCG CGCGACGGGG TACGGGCTGA CGCTCGGCAT TCATACGCGC ATCGACGAAA CGATCGCGCA TGTGATCGGC CGCGCGCACG TGGGCAATAT CTACGTGAAC CGCAACGTGA TCGGCGCGGT GGTCGGCGTG CAGCCGTTCG GCGGGGAAGG GCTGTCGGGC ACGGGTCCGA AGGCGGGCGG CGCGCTGTAT CTGCAGCGTC TGCTGGCGAC GCGTCCGGCC GGTTTGCCGA AGTCGCTTGC GCGGACCTTG ATGGTCGACG CGTCGCAAGG CGCGGCGAAT GGTGGGCAAA GCGCTGCACA AAACGGCAAC GCGGCAAGCG ATAATCCTGC CGCTGCGCTG ACGACGCTGC GCGACTGGTT GATCGCGGAA CGCGAGCCGG TGCTGGCCGC ACGTTGTGAC GGCTACCTGT CGCACATCCC GGCGGGCGCG ACGGCTGTGC TGGCGGGCCC GACGGGCGAG CGCAACACGT ACACGCTCGG CGCACGCGGC ACGGTGCTGT GTGTTGCATC GACAGCGAGC GGCGCGCGCG TGCAGTTCGC GGCGGCGCTG GCGACGGGCA ACAAGGCGCT GTTCGAAGGC GCGGCGGGCG AGCAACTGTA TGCCGCGCTG CCGCCGTCGC TGAAGCAGTA CGCGAGCGTG AAGAAGAACG CCGAAGCATC GTTCGATGCC GCGCTCTTCG AAGGCGACAG CGACGAGTTG CTGGCACTCG TGAAGGACAT CGCGAAGCGC GCGGGTCCCA TCGTGTCGGT GCAGGGCGTC GCGGCACGCG CGCTGGAAAG CGGCGATGAG GATTACGCAC TCGAACGCCT GTTGACGGAG CGTTCGGTGA GCGTGAATAC GGCAGCAGCA GGCGGTAATG CAAATTTGAT GACGATCGGC TGA
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Protein sequence | MASTTLGVKV DDLLRTRLKD AATRLERTPH WLIKQAIFAY LEKIEHGQLP AELSGHHGAT ELADGAADPD ESDGLHPFLE FAQSVQPQSV LRAAITAAYR RPEPECVPFL IGQARLPANI ANDVQAMASK LVEALRSKST GGGVEGLIHE FSLSSQEGVA LMCLAEALLR IPDRATRDAL IRDKISKGDW RSHVGHAPSL FVNAATWGLM ITGKLVTTNS ETGLSSALTR MIGKGGEPLI RKGVDMAMRL MGEQFVTGET ISEALANSRK FEARGFRYSY DMLGEAATTE ADAQRYYASY EQAIHAIGKA AGGRGIYEGP GISIKLSALH PRYSRSQQER TMSELLPRVR ALAILARRYD IGLNIDAEEA DRLEISLDLL EALCFDPELQ GWNGIGFVVQ AYQKRCPFVI DYIVDLARRS RHRIMVRLVK GAYWDTEIKR AQVDGLEGYP VYTRKIYTDV SYLACAKKLL GAPDAVYPQF ATHNAHTLSA IYHLAGQNYY PGQYEFQCLH GMGEPLYEEV TGRDKLNRPC RVYAPVGTHE TLLAYLVRRL LENGANTSFV NRIADETVPV QDLVADPVDE AAKIVPLGAP HAKIPLPRNL YGAERTNSMG LDLSNEHRLA SLSSALLASA NHPWRAAPML EGNEIAVGRA RDVRNPSDHR DLVGTVVEAT PEHVSAALAH AVAAAPIWQA TPVEARADCL ARAADLLEAQ MHTLMGLVVR EAGKSLPNAV AEIREAIDFL RYYSSQIRDE FSNDTHRPLG PVVCISPWNF PLAIFMGQVA AALAAGNTVL AKPAEQTPLI AAQAVRILRE AGVPAGAVQL LPGDGETVGA ALVADARTRA VMFTGSTEVA RLINKTLSNR LDPDGKPIPL IAETGGQNAM IVDSSALAEQ VVADVLQSSF DSAGQRCSAL RVLCLQDDVA DRTLEMLTGA MKELAVGNPD RLSIDVGPVI DAEAKRGIDA HIASMREKGR KVTQMPMPDG CAAGTFVPPT LIELDNIDEL KREVFGPVLH VVRYRRSALD KLLEQIRATG YGLTLGIHTR IDETIAHVIG RAHVGNIYVN RNVIGAVVGV QPFGGEGLSG TGPKAGGALY LQRLLATRPA GLPKSLARTL MVDASQGAAN GGQSAAQNGN AASDNPAAAL TTLRDWLIAE REPVLAARCD GYLSHIPAGA TAVLAGPTGE RNTYTLGARG TVLCVASTAS GARVQFAAAL ATGNKALFEG AAGEQLYAAL PPSLKQYASV KKNAEASFDA ALFEGDSDEL LALVKDIAKR AGPIVSVQGV AARALESGDE DYALERLLTE RSVSVNTAAA GGNANLMTIG
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