| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3016 |
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| Symbol | |
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| ID | 6244497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 3383745 |
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| End bp | 3385445 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642594820 |
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| Product | thiamine pyrophosphate protein |
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| Protein accession | YP_001859232 |
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| Protein GI | 186477762 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTGT CTTCCGATGC TTCAAATATG ACCACGGGCG CACGGCTCAT GGTCGACGCG
CTGCTGACGC ATGGCGTCGA GCGCGTGTTT TGCGTGCCTG GCGAAAGTTT TCTGGCGATC
CTCGATTCGT TGCACGACGA GACGTCGCAG ATTCAGACAG TTGTGTGCCG CCACGAAGCG
GCCGCCGCCA ACATGGCGGA AGCCGTCGGC AAGCTGACGG GCCGGCCGGG CATCGCGATC
GTCACGCGCG GACCGGGCGC GACGCACGCA TCGATCGGCG TGCACACGGC GTTTCAGGAC
TCGACGCCGA TGATCCTGCT GATCGGCCAA TGTGCGCGCG AGCATCTGGA CCGCGAGGCG
TTTCAGGAAA TCGACTACCG GCGCATGTTC GGCCAGATGG CGAAGTGGGT CGCGCAGATT
GACGACGCGC GCCGCATTCC CGAGTACATG AGCCACGCGT TCCACGTCGC GACGTCGGGT
CGCCCTGGCC CTGTCGTACT GTCGTTGCCT GAAGACATGT TGAGCGACGC GTGTGCCGCG
ATGCCGGGTG CGCCCGCTTA TCAGCGCGTG GCGGCCGCGC CGGCGCCGCA GCAGATCGAG
CGTCTGCGCG GCCTGCTCGA AGGCGCGAAG AAACCGATGG TGATCGCGGG CGGCAGCGGC
TGGACGCCGC AAGCGTGCGA AGACCTCCGC ACCTTCATCG AGAACTGGCA GCTACCCATC
GGCCTCGCGT TCCGCTTCCA GGACACGCTC GACAACGAGC ATCCGAACTA TGCGGGCGAT
GTGGGTCTCG GCATCAATCC CGCGCTTGCC AAACGCATCC AGGACGCCGA CGTGCTGCTC
GCGCTCGGCC CGCGCCTGGG CGAAGCGACG ACGAATGGCT ACACGCTGCT CGACATTCCG
AAGACGAAGC AGACATTGAT CCACGTGCAT CAAGGCGCGG ACGAGCTGGG CCGCGTGTAT
GCCGCCGATC TGCCCATCGT GTCGGGCATG CCGGAAATCG CATCGATGCT GGCGGCGCTG
AAACGGGTGG CACAACCCGC CTGGTCAGGC AGCGCGAAGG AAGCGCACGA CGCGTACCTC
GAATGGCGCA AGCCGCGCAT GGTTCCGGGC GATGTGCAAC TCGGCGAGAT CATGCTGCAG
CTTCGCGAAC ATCTGCCGAA GGACGCGATT CTCACGAACG GCGCGGGCAA TTACGCGACA
TGGCTGCATC GTCATTTTGC GTATCGCCAT TTCCGTTCCC AGTTGGCACC GACTAGCGGC
GCGATGGGTT ATGGCGTGCC GGCGGCGATT GCGGCCAAGT CGATGTATCC GGACCGGACG
GTGGTCGCGT TCGCAGGCGA TGGCTGTTTC ATGATGTCGT CATCGGAGAT CGCGACGGCG
GTGCAATACG ACTTGCCGGT GATATTCATC GTCGTGAACA ACAGCCAGTA CGGCACGATC
CGGATGCACC AGGAGCGCCA TTATCCGAAT CGCGTGCATG GAACGGGGCT GACCAATCCA
GACTTCGCGG CGTTTGCAAG ATCATTCGGC GCCCACGGCG AAACGGTGGA ACGCACAGAA
GACTTCATGC CCGCATTCAA GCGCGCGCAA GAGTCGAAGA AACCGGCGGT AATCGAAGTC
CGGATGATCC AGGAAGCGAG CACACCGGGC GCGACACTGG AGCAGGTGCG CGAGCAGGGC
AGGAAACTGC GCGGCGAATA A
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| Protein sequence | MSLSSDASNM TTGARLMVDA LLTHGVERVF CVPGESFLAI LDSLHDETSQ IQTVVCRHEA
AAANMAEAVG KLTGRPGIAI VTRGPGATHA SIGVHTAFQD STPMILLIGQ CAREHLDREA
FQEIDYRRMF GQMAKWVAQI DDARRIPEYM SHAFHVATSG RPGPVVLSLP EDMLSDACAA
MPGAPAYQRV AAAPAPQQIE RLRGLLEGAK KPMVIAGGSG WTPQACEDLR TFIENWQLPI
GLAFRFQDTL DNEHPNYAGD VGLGINPALA KRIQDADVLL ALGPRLGEAT TNGYTLLDIP
KTKQTLIHVH QGADELGRVY AADLPIVSGM PEIASMLAAL KRVAQPAWSG SAKEAHDAYL
EWRKPRMVPG DVQLGEIMLQ LREHLPKDAI LTNGAGNYAT WLHRHFAYRH FRSQLAPTSG
AMGYGVPAAI AAKSMYPDRT VVAFAGDGCF MMSSSEIATA VQYDLPVIFI VVNNSQYGTI
RMHQERHYPN RVHGTGLTNP DFAAFARSFG AHGETVERTE DFMPAFKRAQ ESKKPAVIEV
RMIQEASTPG ATLEQVREQG RKLRGE
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