| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2996 |
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| Symbol | |
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| ID | 6244477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 3356423 |
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| End bp | 3358303 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642594799 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001859212 |
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| Protein GI | 186477742 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.637966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0209641 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACT TCAATCAGAA CCACAATGGC TCGTGGCAGC GCATTCCGAC GCCCGCGAAC
TTCGGCGCGG CACCGGCACA GGCGGCGCCC GACGCGGCTG CGCAGGAACG CATCGCGTCG
ATGCTGCAAG CGGCCGTCGC GCATCACGAG GCGGAGCGCT TCGACGAAGC GGAAACGCTG
TACCGCCAGA TTCTCGCGGC CGATCCGAAT CACGCGGACG CGATACATCT GCTTGGCCTG
ATCGCGTACG AGTTCGGCCA GTACCAGACA GCGTGCGATC TGATCATGGC GGCCATCACG
CGCAATCCGA ACGCGTTGTA CTACTACAAC CTGGGCAACG TGATGCAGGC GTACAAACGG
CCTGCCGCCG CAGCGGAGTG CTTCCGCCAG GCGATCGCGA TGCAGCCCGA CTACGTCGAC
GCGCACAACA ACCTCGGCAA TGCGCTGCGC GCGGTGAAGG ATCATCACGC GGCGGTGCAG
TCTTTCTGCC AGGCGATCAA CCTGAAGCCG GATCACGCGC GCGCGTACAA CAACCTCGCG
AACACGCTGA TGGAACTCGA TGAACTCGAG GCCGCCATCG AGGCATGGCG CTACGCCATC
GCGCTGCGCC CCGATCTCGC GGAGCCGCGC AGCAATCTGC TGTTTGCGCT GAACTATCAG
CAGCAGACGA CGCCGCAAGC GTATCTGGAC GAAGCGCTGA AATTCGGCGA CGCAATGGCG
GCGCGTGCGA TGCCGTTCCA AACGTGGCTC GCCGATGCGG GCTCGCGCGA AGGCCGCCCG
TTGCGCGTGG GCATCGTCTC CGGCGATCTG AAGAAGCATC CCGTCGGGTA TTTCATCGAA
AGCGTGCTCG CGAATCTCGA TGCGTCACGG GTGCAACTGG TCGCCTATCC GACGCGCGAT
GTCGAAGACG AACTTACGGC GCGCATCAAA CCGTCGTTCT CGGCGTGGAC GAGCCTCGCC
GGTGTCGCTG ACGAAGCAGC CGCGCAGCGC ATCCGCAGCG ACGCCATCGA TGTTCTGATC
GACGCATCGG GCCACAGTAC GCACAACCGA CTGCCTCTCT TTGCATGGAA GCCGGCGCCC
GTGCAGGTCA GCTGGCCCGG CTACTTCGCG AGCACGGGCG TGCGCGCGAT CGACTACATC
CTCGGCGATG CGCATGTGCT GCCCGAAGCC GAAGAAGCGC ACTTCGTCGA AAAGCCGTGG
CGTCTGCCCG ACAGCTATCT GTGCTTCACG CCGCCCGTCG ATTCCGTCGA AACAGGCACG
CTGCCGATGC TCGTGAACGG CCACGTCACC TTCGGCTATT TCGGCAACGT GACGAAGGTC
ACGGATCACG CGGTTGGCGT ATGGTCGACG CTGCTGCAGA AAGTGCCCAG CTCCATGCTG
TTCCTGAAGT CCGGCCAGTT CGACGACGCG CACGTACGCG ACGCATTTGT TCGCCGGTTC
GCGACGCGCG GCATTCCGGC GTCGCGCCTG ATCGTCGAAG GACGTTCGGC GCGCGGTGAT
TACTTCACCG CCTATCGTCG CGTTGACATG ATGCTGAGCC CGTTCCCCTA CGGCGGCGGC
ACGACCACAG CGGAAGCCTT CTGGATGGGC GTGCCCGTAC TGTGCCGACA CGGCGACCGC
TTCGTCACGC ACATCGCGGA AACGATCTGC CACGCGGCCG GGCTCGCGGG CTGGATCGCA
GCCGACGACG CCGACTATGT GGAGAAAGCC GTCGCATTCG CAGCAGACCG CGAGGGTCTG
TCGGCGCTGC GCAGCGGTTT GCGCGCGCAG TTGCTCGCCT CGCCGCTGTG CGACGCCGCA
CGCTTCGCGC GCAACTTCGA AGCGGCGCTG CACGGCATGT GGGAACAACG CGTCGCGCAG
GTCGCGGAGG CGGCGCAGTG A
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| Protein sequence | MTDFNQNHNG SWQRIPTPAN FGAAPAQAAP DAAAQERIAS MLQAAVAHHE AERFDEAETL
YRQILAADPN HADAIHLLGL IAYEFGQYQT ACDLIMAAIT RNPNALYYYN LGNVMQAYKR
PAAAAECFRQ AIAMQPDYVD AHNNLGNALR AVKDHHAAVQ SFCQAINLKP DHARAYNNLA
NTLMELDELE AAIEAWRYAI ALRPDLAEPR SNLLFALNYQ QQTTPQAYLD EALKFGDAMA
ARAMPFQTWL ADAGSREGRP LRVGIVSGDL KKHPVGYFIE SVLANLDASR VQLVAYPTRD
VEDELTARIK PSFSAWTSLA GVADEAAAQR IRSDAIDVLI DASGHSTHNR LPLFAWKPAP
VQVSWPGYFA STGVRAIDYI LGDAHVLPEA EEAHFVEKPW RLPDSYLCFT PPVDSVETGT
LPMLVNGHVT FGYFGNVTKV TDHAVGVWST LLQKVPSSML FLKSGQFDDA HVRDAFVRRF
ATRGIPASRL IVEGRSARGD YFTAYRRVDM MLSPFPYGGG TTTAEAFWMG VPVLCRHGDR
FVTHIAETIC HAAGLAGWIA ADDADYVEKA VAFAADREGL SALRSGLRAQ LLASPLCDAA
RFARNFEAAL HGMWEQRVAQ VAEAAQ
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