| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2992 |
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| Symbol | |
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| ID | 6244473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 3349406 |
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| End bp | 3351880 |
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| Gene Length | 2475 bp |
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| Protein Length | 824 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642594795 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001859208 |
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| Protein GI | 186477738 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF
[COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.000746825 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGAGCCG CACTTCCGAC GACACAAAGG ATCACAGTGG ATCACGCAAA TCTTCTCAAT
ACCGCGCTCG CGCACCACCA GGCCGGCCGG CTCGCCGAAG CCAAGGCGAT CTACGACGAG
ATCCTGCGCG CCAATCCCCG GCATTCCGAT GCGTTGCATT TTCTCGGGCT GCTCGCCTGC
CAGATTCAAC AGTACGACGC GGGCATTACG CTGATGCGCC AGTCGATCGC GATTCTGCCC
AACGCGATCT ATCACAACAA CCTCGGCAAC GCGCTGCGCG AGCACGGGCA ACTAAAGCAG
GCGATCGACG GTTATCGCGA GGCCGTCACG CTCGATCCGG GCTACGCGGA AGCGCACAAC
AATCTGGGCA ATGCACTGCG CGAAGACCGT CAGCCGGACG CGGCGATGCG AAGCTGCGCG
CACGCCATCG AATTGCGGCC CGGTTTTGCG GAGGCATACA ACAATCTCGG CAACGCGTTA
AAAGATCTCG GCGAGCTGGA TAATGCCGCG CTTGCGTATC GCAAGGCGAT TTCGTTCAGG
CAGAACTACG CGGACGCGCA CAACAATCTC GGCAACGCGC TGATGGAGCA GGGCAAGTAC
GACGAGGCAA TCGACAGTTA TCGCAGCGCG ATCGCCCTCG ACGCGAACCG CGCGTTGATG
CACAACAGTC TGGGCACGCT GCTGCTTGCG CGCGGCGAAC TCGACGAGGC TGCGGCGAGT
CTGCAGAGGG CGGTCGAACT CGATCCCAAC AGGCCGGGCG TGCACAACAA CCTGGCCAAT
ACGCTGCGCG ACATGGGCAG ACTGGAAGAG GCGCGCACCC ATTACTCGCG GGCGTTGCAG
CTTGCGCAGG CGATCATCGA CTCGTACCGG GGCGGCGCGG CGGCGCCGTT TGCGCAAGTC
CGTTCGACCG AACCGCGCCT GACGCTCGCC GAGGGTTATG CGACGCTCGG CAATGCGTGG
TACGGCCTGT ATCGCTACGA CGAGGCGATC GACAGCTATT TGCGATCCGT CGAGCTTGCC
GACGACGATG CCGAAGTTCA TCACAATCTC GCCGTCGCGT ATCTGAAGAC GGAGCGTCCC
GCGCAAGCAC TGCATTACGC GCGCAAGGCG CTTGAACTCA AGGACGGTTC CTCGCGGATG
CACATCAATC TCGGCGACGT CCTGCGCTCG CTGGGCGAAC TGGAGGCCGC CGCGAACAGC
TATCGGAGCG CGATCGAGCG GTCGCCCGAT GCCGACGTCG CGCACACGGC ATTGCTGTTT
TGTGAGGCAA GCATGTCGCG GCGACCGGTC GAAGATTATC TGGCCGATGC CGTCTACTTC
GGCAAGCGCA TGGCCGCGAA CGTCACGCCG TTCACGCACA CGCGCATGCC GCGCGGCTCG
CGGCCGCTGC GCGTGGGCTT TGTCTCGGGC GATTTGCGCA CACATCCCGT CGGCATCTTC
ACCGAAAGCG TGTTGCGTCA TATCGATCCG TCGCGTGTCG AGCTGATCGC CTATCAGACC
AACGACGTCG AAGACGACAC GACGCAGCGT CTCAAGCCGC TTTTCGGTGA ATGGACGCAG
CTTTCGAAGC TCTCACGCGA GGCCGCCGCC AAGCGGATCT TCGACGATCG TATCGACATT
CTGCTCGACA TGTCGGGTCA CACGGCCTTC AACCGGCTCG CCGTGTTCGC GATGAAACCG
GCGCCCGTGC AGGTGACGTG GCTGGGGTTC TTTGCATCGA CGGGCATCGA GCAGATCGAC
TATGTGCTCG GCGACCGCTA TGTGTTGCCG CCCGAAGAAG CACATCATTT CATCGAAAAG
CCGTGGCATC TGCCGGACGG ATACCTGTGC ATGACGCCGC CCGCGCACGA TGTTGCCGTA
GGTGCGCTGC CGATGCTGGC GAATGGCTTC GTCACCTTCG GCTATCTCGG CAAGCTCGCG
AAAGTGACGG ACGACGTGCT CGATCTGTGG GCGCGCGTGC TGCGCGAAGT GCCCGGTTCT
CGCCTTCTCA TCAAGGCGCA TGAGCTCGAC CGCAAGCATG CCGTCGACGC GACGCGTCGG
CGCTTCGCCG GGCGCGGCCT CGACGCGGAA CGGCTTCTGC TCGAAGGCGG ATCGAAGCGC
GACGAGTACT TCAAGACGTA TCATCGCGTC GATATCGTGC TCAGTCCGTT CCCGTATCCG
GGCGGTACGA CGACGGCGGA AGCACTGTGG ATGGGGGTGC CCGTCGTCGC GATGAAGGGC
GACCGCTTTC TCGGTCACAT CTGCGAAAGC GTGCTGCAGT CGGCCGGCTT CGGCGACTGG
GTCACCGGCG ATGCGCAGGG CTACATCGCG ATTGCGCGCG CACTGGCCGC CGACCGCGAC
GCGCTGGCCA CGCTGCGCGC CGGTTTGCGC GAACATGTTC TGGCCTCGCC GATGTGTGAC
GCGCAACGCT TCGCGCGCAA CTTCGAAGAT GCGCTCGACG GCATGTGGCG CGTGTACGAG
CGAGACTCTG CCTGA
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| Protein sequence | MRAALPTTQR ITVDHANLLN TALAHHQAGR LAEAKAIYDE ILRANPRHSD ALHFLGLLAC
QIQQYDAGIT LMRQSIAILP NAIYHNNLGN ALREHGQLKQ AIDGYREAVT LDPGYAEAHN
NLGNALREDR QPDAAMRSCA HAIELRPGFA EAYNNLGNAL KDLGELDNAA LAYRKAISFR
QNYADAHNNL GNALMEQGKY DEAIDSYRSA IALDANRALM HNSLGTLLLA RGELDEAAAS
LQRAVELDPN RPGVHNNLAN TLRDMGRLEE ARTHYSRALQ LAQAIIDSYR GGAAAPFAQV
RSTEPRLTLA EGYATLGNAW YGLYRYDEAI DSYLRSVELA DDDAEVHHNL AVAYLKTERP
AQALHYARKA LELKDGSSRM HINLGDVLRS LGELEAAANS YRSAIERSPD ADVAHTALLF
CEASMSRRPV EDYLADAVYF GKRMAANVTP FTHTRMPRGS RPLRVGFVSG DLRTHPVGIF
TESVLRHIDP SRVELIAYQT NDVEDDTTQR LKPLFGEWTQ LSKLSREAAA KRIFDDRIDI
LLDMSGHTAF NRLAVFAMKP APVQVTWLGF FASTGIEQID YVLGDRYVLP PEEAHHFIEK
PWHLPDGYLC MTPPAHDVAV GALPMLANGF VTFGYLGKLA KVTDDVLDLW ARVLREVPGS
RLLIKAHELD RKHAVDATRR RFAGRGLDAE RLLLEGGSKR DEYFKTYHRV DIVLSPFPYP
GGTTTAEALW MGVPVVAMKG DRFLGHICES VLQSAGFGDW VTGDAQGYIA IARALAADRD
ALATLRAGLR EHVLASPMCD AQRFARNFED ALDGMWRVYE RDSA
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