Gene Bphy_2990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_2990 
Symbol 
ID6244471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp3347484 
End bp3348911 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content62% 
IMG OID642594793 
Productflagellar hook-associated 2 domain-containing protein 
Protein accessionYP_001859206 
Protein GI186477736 
COG category[N] Cell motility 
COG ID[COG1345] Flagellar capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.000444262 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCACCA CGTCGACTTC GAACTCTTCA ACTGACGTTA CTGCCCTGCT ACAGCAGGCA 
GCGCAGTCCA TCATCAGCGG CTCGACCAAG TCGACCCTCG ATGTGAATTC ACTGGTGTCG
GCGCTCGTGA CGGCGAAAAC CGCGGCTCAA TCCTCGGCAA TCACGACCAA ACAGACTTCG
GACAACGCCG AGCTCTCCGC AATCGGCAAG CTCAAATCGG CGCTCTCGTC GCTGCAGACG
GCACTGAGCG GTCTGTCCGA CGGCACGTCG CTCAACCAGC TCGCAGTCGC GGTCAGCGGC
ACGGGCGTAA CGGCAACGAC GACAACCGGC AAGGGCGCGG TGGCAGGCAA CTACACGTTG
CAAGTCACCA ATGTCGCGAC CGCCAACAAG ATTTCCTCGC AGGCCTACGC CTCGGGCGCG
AGCCTCGGCA GCGGCACGCT GACGGTGGGT GTCGGCAGCA ATTCCATGCA GATCAACGTG
TCGTCGTCGG ATACGCTGGC GACCATCGCC AGCGCGATCA ATACGGCGAA CAACAATCCG
GGCGTATCGG CTGCCGTCAT TACGGCGGCC GACGGCCAGC ATCTGGTCCT GACCTCGACC
CAAACGGGCG CCGCCAACAC CGTATCGATA TCGGCGGGCG CGGGCCTCGA TGCCGGCCTC
AACACGGGCA GCTTCACGCA GGTCACGGCG GGCAAGGATG CGAATTTTTC GATCGACGGC
AACGCTATCA CGAGCGCGAC GAACGTCATC ACGTCTGCGC TGACAGGCGT GAACATCGAC
ATCTCGGGCG CGACCGCGAA CAGCACGCAG ACCATCTCCA TCACGAACGA CACGTCCGCC
TCCGAAAAGG CGATCAACAG CTTCGTCACC GCGTACAACA ACTACATCAC GACGGCCACC
GGGCTGACGT GGGACTCGAC CCAGGCGACG GGCTCGCAAG CCGGCCCGCT GCTCGGCGAT
GCAATGACGA ACACGATCAC GAACGGCCTC GGCAGCCTGG TCGGCGGTGG CATTACCGTC
GGCGGCAAGA CGATCAGCCT GTCGTCGATC GGCATCAACC TGCAGCACGA CGGCACGTTG
TCCGTCGATT CGACGACGCT GGAGAACGCG CTGTCGAGCA ACAGCTCGAC CGTCGCGGCC
GTGTTCAACA CGACGAACGG CATCGGCACG ACGCTGAACA ACTTCATCAA TACGTACACG
CAGACGAGCG GCACGATCGA CCAGCGCACG CAAGCACTGA ACACCGACCT CAGCAATCTT
TCGGATCAGG CGACGCAGCT CACGAACTAT CAGAGCACGC TGACCGACCA GTACAACGCG
CAGTTCTCGG CGCTGAACAC GCTGATGACG ACGATGCAGA ACAACACGGC CTATCTGAAC
CAGCTGTTCG GCGGCGGTGG CCTGACGGGC TCGCTGAACG CCAAGTAA
 
Protein sequence
MTTTSTSNSS TDVTALLQQA AQSIISGSTK STLDVNSLVS ALVTAKTAAQ SSAITTKQTS 
DNAELSAIGK LKSALSSLQT ALSGLSDGTS LNQLAVAVSG TGVTATTTTG KGAVAGNYTL
QVTNVATANK ISSQAYASGA SLGSGTLTVG VGSNSMQINV SSSDTLATIA SAINTANNNP
GVSAAVITAA DGQHLVLTST QTGAANTVSI SAGAGLDAGL NTGSFTQVTA GKDANFSIDG
NAITSATNVI TSALTGVNID ISGATANSTQ TISITNDTSA SEKAINSFVT AYNNYITTAT
GLTWDSTQAT GSQAGPLLGD AMTNTITNGL GSLVGGGITV GGKTISLSSI GINLQHDGTL
SVDSTTLENA LSSNSSTVAA VFNTTNGIGT TLNNFINTYT QTSGTIDQRT QALNTDLSNL
SDQATQLTNY QSTLTDQYNA QFSALNTLMT TMQNNTAYLN QLFGGGGLTG SLNAK