Gene Bphy_2974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_2974 
Symbol 
ID6244455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp3331639 
End bp3333957 
Gene Length2319 bp 
Protein Length772 aa 
Translation table11 
GC content66% 
IMG OID642594777 
ProductCheA signal transduction histidine kinase 
Protein accessionYP_001859190 
Protein GI186477720 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.000131554 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACACTCG ACATCACTCA GTTCTACCAG ACGTTCTTCG ACGAAGCGGA CGAGCTGCTC 
GCACAGATGG AGCAACTGCT CCTGAACCTG GACGTCGGCC ACCCGGATCC CGAGGATCTC
GCGGCCATCT TTCGCGCGGC CCACTCGATC AAGGGCGGCG CGGCGACGTT CGGCTTCACC
GCGCTGACGG AAACGACGCA CATTCTCGAG TCGCTGCTCG ACCGCGCGCG CAACAACGAA
ATCGTGCTGC GCAAGGACAT GATCGACACG TTCCTCGAAA CGAAGGACGT GCTGTCCGGC
CAGCTGGCCG ACTATCGCGC GAGCGCCGAG CCGGACGCCG CTGTCGCGGC CGCGATCTGC
GCGAAGCTCG AACGCCTGCA CGCCGAAAGC CGCGGCGAAG TGCCTGCCGC CGCCGCACCC
GCTGCAGCGC CGGCACCCGT GGCAGCGCCC GCTGTGGCAG TGGCCGTGGC GGAAGGCCAT
GCGCCGGAGC ATGTCGTCGA ACAGGCAGTA GAAGCCGCAG GCGAATGGGC AGAGAACGAA
CCGGCCCAGA CCGGCGCTGC TTCGTCCGAT GCGGCTGCAG GACCCCATCT GAAAATTACG
CTACGGGGCG TGGGGGAAAA GGACCAGGAA CTGCTCACGG AAGAACTGGG CAATCTGGGC
CGAATCGTCG GACAGGTGAA GGCGGGCGGC GACATCACGC TGTGGCTGGA ATCCGATGTG
TCGTCCGACG ACATCACGGC CGTGTGCTGT TTCGTGATCG ACGAAAGTCA GATCGTGATC
GGCCGCGGCG CAGCGCCGGC AAGCGGCGCG GAGCAGGGTG CGCCTGGAGC ATCCGCATCC
GCCCAGTCCG AGCCGGCGCC GGCAGCACAG GCAGTAGAGG GCATGGCGAG CGGCGGCGCG
GGGGCGCCAG CCGCCGTCGT GCAGGCTGCC GCCGTTGCAC AGCCTGCGGC TCAGCCCGCA
GCACCAGAGG CGCCTGCTCC TGCCGACCCC GCAATCGTTG CACCGGCGGC GGCAGCGGAA
CCGGCGACGG GCGCGCCGGC ACCGGCAGCA GCGGCGTCCG CACCGAAAGC AGCGCCTGCA
TCCGCCGAAG GCGATCGCAA GGCGCGTCCG GCAGCGGCCG CCAATGCAGA AGGCAGCTCG
ATCCGCGTGG GCGTCGAAAA GGTCGACCAG CTGATCAACC TGGTCGGCGA ACTTGTGATC
ACTCAGGCGA TGCTGGCCGA GACCACCAGC ACTTTCGATC CGGCGCTGCA CGACCGCCTG
TTCAATGGCA TGGCGCAACT GGAGCGCAAC GCGCGCGATC TCCAGGAAGC CGTCATGTCG
ATCCGCATGA TGCCGATGGA TTACGTCTTC AGCCGATTCC CGCGTCTCGT GCGCGATCTG
GCGGCGAAGC TCGGCAAGCA GGTTGAACTC GTCACCTTCG GTCAGGCGAC CGAACTCGAC
AAGAGCCTGA TCGAACGCAT CATCGATCCG CTGACTCACC TCGTGCGCAA CAGCCTCGAC
CACGGCATCG AAACGGTCGA AGCGCGCAAG GCGGCGGGCA AGGATTCGAC GGGCCAGCTG
GTGCTGTCGG CGGCCCATCA CGGCGGCAAC ATCGTGATCG AAGTCAGCGA CGACGGCGCC
GGTCTGCGTC GCGACAAGAT TCTCGCGAAG GCCGCGAAGC AGGGCATGAC TGTCAGCGAC
ACGATGACGG ACGACGAAGT CTGGAACCTG ATCTTCCTGC CGGGCTTCTC GACGGCCGAG
CAGGTGACGG ACGTCTCGGG CCGCGGCGTC GGCATGGACG TGGTGAAGCG GAACATCCAG
TCGATGGGCG GTCACGTCGA AATCACGTCG CAGGCGGGCA AGGGCAGCAC GACGCGCATC
ATTCTCCCGC TCACGCTGGC GATTCTCGAC GGCATGTCGG TGAAGGTGGG CAGCGAGATT
TTCATCCTGC CGCTGAACTT CGTGATGGAG TCGCTGCAGC CGCAGGCCGA CGACATCTAC
ACCGTGGCGA ACGGCGAACG CGTCGTGCGC GTGCGCGGCG AATATCTGCC GCTGGTTGCG
CTGCACGAAG TGTTCTCGGT CGACGGTGCG CGCACCGATC CGACGCAGGG CATCGTCACC
ATCATGCAGA CGGAAGGTCG GCGCTTCGCG ATGCTGATCG ACGAGCTCGT CGGCCAGCAG
CAGGTGGTGG TGAAGAACCT CGAAACGAAC TACCGCAAGG TACACGGCAT TTCCGCCGCG
ACCATTCTCG GCGACGGCAG CGTCGCGCTG ATCGTGGACG TGGCGGCGCT GAACCGCGAA
ACGCGGGCGT CGCACGGTGC GGCGCTCTCG CTCGCGTGA
 
Protein sequence
MTLDITQFYQ TFFDEADELL AQMEQLLLNL DVGHPDPEDL AAIFRAAHSI KGGAATFGFT 
ALTETTHILE SLLDRARNNE IVLRKDMIDT FLETKDVLSG QLADYRASAE PDAAVAAAIC
AKLERLHAES RGEVPAAAAP AAAPAPVAAP AVAVAVAEGH APEHVVEQAV EAAGEWAENE
PAQTGAASSD AAAGPHLKIT LRGVGEKDQE LLTEELGNLG RIVGQVKAGG DITLWLESDV
SSDDITAVCC FVIDESQIVI GRGAAPASGA EQGAPGASAS AQSEPAPAAQ AVEGMASGGA
GAPAAVVQAA AVAQPAAQPA APEAPAPADP AIVAPAAAAE PATGAPAPAA AASAPKAAPA
SAEGDRKARP AAAANAEGSS IRVGVEKVDQ LINLVGELVI TQAMLAETTS TFDPALHDRL
FNGMAQLERN ARDLQEAVMS IRMMPMDYVF SRFPRLVRDL AAKLGKQVEL VTFGQATELD
KSLIERIIDP LTHLVRNSLD HGIETVEARK AAGKDSTGQL VLSAAHHGGN IVIEVSDDGA
GLRRDKILAK AAKQGMTVSD TMTDDEVWNL IFLPGFSTAE QVTDVSGRGV GMDVVKRNIQ
SMGGHVEITS QAGKGSTTRI ILPLTLAILD GMSVKVGSEI FILPLNFVME SLQPQADDIY
TVANGERVVR VRGEYLPLVA LHEVFSVDGA RTDPTQGIVT IMQTEGRRFA MLIDELVGQQ
QVVVKNLETN YRKVHGISAA TILGDGSVAL IVDVAALNRE TRASHGAALS LA