| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2952 |
|---|
| Symbol | flgF |
|---|
| ID | 6244433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 3305175 |
|---|
| End bp | 3305933 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642594755 |
|---|
| Product | flagellar basal body rod protein FlgF |
|---|
| Protein accession | YP_001859168 |
|---|
| Protein GI | 186477698 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG4787] Flagellar basal body rod protein |
|---|
| TIGRFAM ID | [TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.464579 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGGC TCATATACAC CGCGATGTCG GGCGCGACCC AGGCGCTCGA ACAGCAGGCC
GTGGTCGCGA ACAACCTCGC GAACACCTCG ACCACGGGTT TCAAGGCGCA GCTCGCGACG
TTCCGCGCCG TGCCGATGGC GTTCGGCGAC GGCAGCACGA TTCAGGACGA CACCACTCGC
ACTTTTGTGC TGTCGTCCAC GCCGGGCGCG GATTACACGC CCGGCCCGAT CCAGCAGACG
GGCAACCCGC TCGACGTCGC GATCCAGGGT CCGGGCTGGC TGTCCGTTTT GACGCCTGAC
GGCGAGGAAG CGTACACGCG TGCAGGCAAC CTTCATGTCG ACGAAAACGG CCAGCTCGTG
ACGGCCAACA ACCTGCCCGT GGTCGGCGGC GGCGGCCCGG TGGCCGTGCC ACCCGGCGCG
CAGGTGACCA TCGGCAAGGA CGGCACCGTA TCGGCGCTGA TGCCGGGCGA CCCCGCCACG
ACGATCGCAC TGGTCGATCA GTTGAAGCTG GTGAATCCCG CCCCCGGCGC GCTCAAGCGC
GGCGACGACG GCCTCTTTCA CACGAACGAC GGCAATCCCG CCGACGCCGA TCCCGCTGTG
GTCGTCGCGG CAGGCGCGCT GGAAGGCAGC AACGTGAACC CGGTATCGGC GATGGTCTCG
ATGATCACCA ACGCTCGCCA GTTCCAGATG CAGACGAAGA TGATCGAGTC CGCCGACCAG
AACGAGCAGT CGGCCAACAA GCTGCTGAAC TTCAGCTAA
|
|---|
| Protein sequence | MDRLIYTAMS GATQALEQQA VVANNLANTS TTGFKAQLAT FRAVPMAFGD GSTIQDDTTR
TFVLSSTPGA DYTPGPIQQT GNPLDVAIQG PGWLSVLTPD GEEAYTRAGN LHVDENGQLV
TANNLPVVGG GGPVAVPPGA QVTIGKDGTV SALMPGDPAT TIALVDQLKL VNPAPGALKR
GDDGLFHTND GNPADADPAV VVAAGALEGS NVNPVSAMVS MITNARQFQM QTKMIESADQ
NEQSANKLLN FS
|
|---|
| |