| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2936 |
|---|
| Symbol | |
|---|
| ID | 6244418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 3292399 |
|---|
| End bp | 3293910 |
|---|
| Gene Length | 1512 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642594740 |
|---|
| Product | flagellar hook-length control protein |
|---|
| Protein accession | YP_001859153 |
|---|
| Protein GI | 186477683 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG3144] Flagellar hook-length control protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCCTC TTTCACTGAT CAACTCGCTG CTCGCCGCTT CGAGCAGCAC ATCGGGCAGC
AGCGCATCGA ACGGCGCGAA CGCCGGCAGC GCGCTGCCGT TTTCGACCAC GCTGCAGCAA
AGCATCAACG CACAGAACCT GGCCGCCGCG CCTGCGCCGT CGCCCGCACC GAGCGCGCCG
TCGCAGCCGG CATCGAACGG TTCGAGCGTG CACGACGCGC CGCCCGCCGA CGATTCGTCC
AACAGCACCG ATGCGTCCGA CAGCTCGAAC AGCACCGGCA GCACCCAGGC CGCGAGCCAG
ACCGACAGCA CGCAGCCAGG CAGCGCGGCG AACGGCGCGA ATGGTGCGAG CGGCACGAAT
GGCAAGGACA AGGCCGATTC GGTTTCGAAG CAGAACGACG CCGCGCCGAC CACGAGCGCG
GCCGCCGCTG AGACTGCCGC AGCCGCCGCA GCAGCAGCCG CCGCGGCTCA GGCACAAGCT
CAGGCGAGCG GCGCCACGGA CGCAGCCAAT GCAGCGAACG CGGCAACGCA ACCGGCGATG
CCTGCGTCGA CCGACGTGGC CGGCAATACA ACGACGCCCG TGATTCAGAC GCCGTCGAAG
AAGATCGCAT CGCTCGATCC GAAAGCCACC CAGGACGCAT TGCAGGCCGC CTTCGCCGCA
TTGGCGAGCG GCCAGGGCGT GGCGCCCGCT GCGGGCGCAG CGACGTCCGC GAATGCGGGC
GCTGCCGCCA CGGACGACGT AACGCTCGCT GGCCGCGGTG CTGGCTCAGG CAAGGGCCTG
ACCTTCGGTG ACCTGCGCGC CGCGAAGGGC GACGCAGCAC CGGCGAACAC TGCCTCAGCC
GCCGCGCCCG CCACTGTGAC AACCGCGCCC CTGAGCCCGG CTGAAACGCT CGCCGCTGCC
GCCGCCGGCT CGAATGCCGC GCAGGCAGCG CCCGTGCCCG CGGCGACCGC GGACACGAAC
GCCGCGCTCG CCGCGACTCA GGCCGCATCG GCGGCCGCCG CCGCGAGCGC GACTGCCACG
CTCACTCAAG GCTCGAACCC GGCAACGGCT GCGATGGCGA ACGCCATCGC ACCTCAAGTC
GGCGCCCATG ACTGGGAAGA CGCCTTCAGC CAGAAAGTCG TGTTCCTCAC CAACGCGCAT
CAACAGACGG CAGAGCTCAC GCTCAATCCG CGCGACCTCG GCCCTCTACA GGTCGTCCTC
CAGGTTGCCG ATAACCATGC ACATGCCCTT TTTGTTTCGC AGCATCAGCA GGTGCGCGAC
GCGGTCGAAG CCGCGCTGCC GAAACTGCGC GAAGCGATGG AACAAGGCGG CATCGGGCTG
GGAAGCGCGA GCGTCAGCGA CGGCTTTGCC CGGCAGACCA GCCAGCAGGG CCAGGACCAG
AGCGGCAGCA CGCGCAGCGG CCGTGGCGGC AGCCGCGGCA GCAACGAGGG CATCGACATC
GCAGGCGGCA GCGCGACGAC AGTGAGCATG CCCGTGCGCC GCACGGTCGG ACTCGTCGAT
ACGTTCGCGT GA
|
|---|
| Protein sequence | MSPLSLINSL LAASSSTSGS SASNGANAGS ALPFSTTLQQ SINAQNLAAA PAPSPAPSAP
SQPASNGSSV HDAPPADDSS NSTDASDSSN STGSTQAASQ TDSTQPGSAA NGANGASGTN
GKDKADSVSK QNDAAPTTSA AAAETAAAAA AAAAAAQAQA QASGATDAAN AANAATQPAM
PASTDVAGNT TTPVIQTPSK KIASLDPKAT QDALQAAFAA LASGQGVAPA AGAATSANAG
AAATDDVTLA GRGAGSGKGL TFGDLRAAKG DAAPANTASA AAPATVTTAP LSPAETLAAA
AAGSNAAQAA PVPAATADTN AALAATQAAS AAAAASATAT LTQGSNPATA AMANAIAPQV
GAHDWEDAFS QKVVFLTNAH QQTAELTLNP RDLGPLQVVL QVADNHAHAL FVSQHQQVRD
AVEAALPKLR EAMEQGGIGL GSASVSDGFA RQTSQQGQDQ SGSTRSGRGG SRGSNEGIDI
AGGSATTVSM PVRRTVGLVD TFA
|
|---|
| |