| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2921 |
|---|
| Symbol | |
|---|
| ID | 6244404 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 3276958 |
|---|
| End bp | 3277449 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642594726 |
|---|
| Product | LrgA family protein |
|---|
| Protein accession | YP_001859139 |
|---|
| Protein GI | 186477669 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1380] Putative effector of murein hydrolase LrgA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCGC CGTTGATCGC CCGGTTTGCC GCCTCCATCC GCCTCGATGC GACCTCACGC
GTCACGAAGG TCGGCCGGAT TGCCGTGCAG AGCGCGGCCA TTGCCGGGGT CTGGTTCGCC
GCCGATTTCA TCGTCCGCCG ATTCGGTCTG CCCGTGCCGG GCGGCGTGGT GGGCCTGATC
GCGCTGCTGG CGTTGCTGTT CTGCGGCGGA ATTGCGCCGC GCTGGGTGAA GGCGGGCGCC
GACTGGCTGC TGTCGGACAT GCTGTTGTTC TTCATTCCGG CTGCCGTCGC GGCCGTGCAA
TACGGCGGTC TGTTCCGGGA AGACGGCTGG CGCCTCGCGC TGGTCGTGGT CGCGGGCACG
CTGATGGTGA TGGTAGCCGT CGCATTTGCC GTCGAGCAGG CCGCGCGCCT TGAGCGCCGC
CTCGCACTGC GTCGCGTGAT GGTTCAGCGT GCGCACGTCG AGCGCCGCGC CGCCGGCCGT
CACTTCCTGT AA
|
|---|
| Protein sequence | MISPLIARFA ASIRLDATSR VTKVGRIAVQ SAAIAGVWFA ADFIVRRFGL PVPGGVVGLI
ALLALLFCGG IAPRWVKAGA DWLLSDMLLF FIPAAVAAVQ YGGLFREDGW RLALVVVAGT
LMVMVAVAFA VEQAARLERR LALRRVMVQR AHVERRAAGR HFL
|
|---|
| |