| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2908 |
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| Symbol | |
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| ID | 6244391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 3262614 |
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| End bp | 3263225 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642594713 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001859126 |
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| Protein GI | 186477656 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGCGC AGTCCACCGT CCCCGCTGTC CCCTCACCGT CCTGCACCGT TCACATTGTT
CCCGTCACGC TCGCGTTCGC GCTCGAAGCG CACCGCGCCT CGCGCTTTCA CGAAGCCGAA
TCGTTGTACC GCGAAGCACT CGACGTCTGC CCCAGCCATC CGCTCGCGCT GCATGGCTAT
GGCGTGCTGC TGCATCAACG CGGCCAGCAT GCGCAAGCGC TCGACTACAT CGACCGTTCG
CTCGAACTCG AGCCTGACAA TGCGGAGTGC TGGAACGACC GCGGCTTCGT GGCCGACGCG
CTCGGCGACA CGGCGCTGGC GCTGCGTTGC TACCGCGTGT CGCTGGCGCT CGATCCGCGT
TCGCCCGATG CGCACAACAA CATCGCCGTC GCACTCGAAG CACAAGGCAA GCTTGACGAA
GCGGTGCATC ACTATCGCGA GGCGTTGAAG ATCGATCCGA CGCTCGCAGA CGTGCATCTG
AATCTTGGCT CGGCGCTCGA TCGCCTGATG AAGTTCGACG ATGCCGACGA GCACTATCGC
GCGCTGCTGT CGCTGAATGC GCGCACCGCC AACGTCCGTC TGAAAACGAA CGGTTCGCCA
GCCCGTCAAT AA
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| Protein sequence | MHAQSTVPAV PSPSCTVHIV PVTLAFALEA HRASRFHEAE SLYREALDVC PSHPLALHGY
GVLLHQRGQH AQALDYIDRS LELEPDNAEC WNDRGFVADA LGDTALALRC YRVSLALDPR
SPDAHNNIAV ALEAQGKLDE AVHHYREALK IDPTLADVHL NLGSALDRLM KFDDADEHYR
ALLSLNARTA NVRLKTNGSP ARQ
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