Gene Bphy_2904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_2904 
Symbol 
ID6244387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp3258573 
End bp3259625 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content68% 
IMG OID642594709 
Producturea amidolyase related protein 
Protein accessionYP_001859122 
Protein GI186477652 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1984] Allophanate hydrolase subunit 2 
TIGRFAM ID[TIGR00724] biotin-dependent carboxylase uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.293477 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACG TGATACGCGC GGGTCTTCTG ACCACGATCC AGGATCTCGG CCGGCATGGT 
TACCGGCATC TCGGCGTCGC GATGGGCGGC GCGCTCGACC GGCTGTCGCT CGAAGTGGGC
AATCGGCTGG TCGGCAACCG GCCCGATGCC GCCGGGCTCG AAATTACCTT CGGCCCCACG
GTGCTGCGCT TTCCGCGCGC GACGCGCGTC GCGATTACGG GCACCGAATT CGGCGCGACG
CTCGACGGCA AGCCTGTCTA TTCGTACTGG AGCCTGCCCG TCAAGGCCGG CCAGGAACTG
ACGCTGAACG CGGCCAAACG CGGGATGCGC GGCTACGTGT GCATCGCTGG CGGCATCGAC
GTGCTGCCGA TGCTCGGTTC GCGCAGCACG GATCTGCATG CGGGCTTCGG CGGACTTGGC
GGCCGCGCGC TGCGCGACGG CGACCGCCTG CCCATCGGCG CGCCGCGACC GGGCGCAGGG
TCCGGCTTTT CGCCCGATGC GCCGGAGTTC GGCGTGAAGG CGCCCGCGTG GTGCAAGTTC
GTACTCGTCG ACGAGCCCGT GCGGCGCGGC CGTCATCCGT CGGGCGTCGC GTGGGCGCCG
CCCGTTCGCG TGCTGCCTGG CCCCGAGTAC GACAGCTTCA CGGCCGACGC GCAGGAAGCG
TTCTGGAACG ACGAATGGCT CGTCACGCCG AACAGCAACC GCATGGGCTA CCGGCTGTCC
GGCACGGAAC TGAAGCGCAC GCAAAAAACG GATCTGCTCT CGCACGCGGT GATGCCCGGC
ACGATCCAGG TGCCGCCCAA CGGCCAGCCG ATCATCCTGA TGAGCGACGC GCAGACCACG
GGCGGCTATC CGAAGATCGG CGCAGTGATT CACGCGGATT TATGGAAGCT CGCGCAGGTG
CGCCTGAACG GCGCGGTGCG CTTCATTCCG ACCACACCTT ACGAAGCGCG CCAGGCGCTG
ATCGAGGAAC GCAAGTACTT GCGGCAGATC GATGCCGCGA TCGGCATGCA TGAAGAACGC
TGCGCGCGCG TTGCTGCGTC CGCAGCGGTG TAA
 
Protein sequence
MIDVIRAGLL TTIQDLGRHG YRHLGVAMGG ALDRLSLEVG NRLVGNRPDA AGLEITFGPT 
VLRFPRATRV AITGTEFGAT LDGKPVYSYW SLPVKAGQEL TLNAAKRGMR GYVCIAGGID
VLPMLGSRST DLHAGFGGLG GRALRDGDRL PIGAPRPGAG SGFSPDAPEF GVKAPAWCKF
VLVDEPVRRG RHPSGVAWAP PVRVLPGPEY DSFTADAQEA FWNDEWLVTP NSNRMGYRLS
GTELKRTQKT DLLSHAVMPG TIQVPPNGQP IILMSDAQTT GGYPKIGAVI HADLWKLAQV
RLNGAVRFIP TTPYEARQAL IEERKYLRQI DAAIGMHEER CARVAASAAV