| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2902 |
|---|
| Symbol | |
|---|
| ID | 6244385 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 3257210 |
|---|
| End bp | 3257722 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642594707 |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_001859120 |
|---|
| Protein GI | 186477650 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG5631] Predicted transcription regulator, contains HTH domain (MarR family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.146319 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGCC ATCCGACCAA AATCGTCTCA TCGGAGCATC TTGTTTCTGA GTTCAGTGCA
GAACTGTCCG AACTGGAATA CGGGTTGATC ATGGCGAGCA ACGCGTTCAA CCGCTGGATG
GTCCGTTGCA TGGCGGCGGC TGGGGACAAG GACATGACGG CGATCGAGGT GTCGCTGCTG
CACCATGTGA GTCATCGTGA GCGGCGCAAG AAGATTGCCG ACATCTGTTT TGTGCTGAAC
ATCGAGGACA CGCACGTCGC GACGTACGCG CTCAAGAAGC TTGTAGCTAG AGGGTATGTA
AAAAGCGAAA AGACCGGCAA GGAGGTGTTC TTTTCGGCGA CGCAGGCGGG GCGCGACTTG
TGCATGAAGT ATCGCGAGGT GAGGGAGAAC TGTCTGATCG CGACGTTGAA GGAAAGCGGG
CTCACCAATG AGCAGATCGG GGAGGCGGCG CAGTTGATGC GCAATGCTTC CGGGATGTAT
GACACCGCTG CGCGGGCGGC TGCATCTTTG TAG
|
|---|
| Protein sequence | MARHPTKIVS SEHLVSEFSA ELSELEYGLI MASNAFNRWM VRCMAAAGDK DMTAIEVSLL
HHVSHRERRK KIADICFVLN IEDTHVATYA LKKLVARGYV KSEKTGKEVF FSATQAGRDL
CMKYREVREN CLIATLKESG LTNEQIGEAA QLMRNASGMY DTAARAAASL
|
|---|
| |