Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_2900 |
Symbol | |
ID | 6244383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | - |
Start bp | 3254432 |
End bp | 3256405 |
Gene Length | 1974 bp |
Protein Length | 657 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642594705 |
Product | lytic transglycosylase catalytic |
Protein accession | YP_001859118 |
Protein GI | 186477648 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.152678 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAAC GCCTTTTCCG AGTATATCGC GCGGCCAGTC TGGCGCTCGC CGCGGCGGCA CTCGTCGCGT GCAGCACGGC CTCCGCGGTC AAGCCCATCC AGCTCTCCCA ACTCACCAAC GACGACCAGA TTTTCGTGCA GTTGCGCGAG GCAGCGCGCA ACAACGACGC AGGCCGCGCT GCGCAACTCG CGGCGATGAT TCCGGACTAT CCGGCGCCCG CGTACCTCGA ATACTTCCAG CTGAAGCCGC AACTGTTCGA CGGCTCGGGC CATCCGCGCA TCGACGCAGC CGACGCACCC GTGCTGTCGT TCTTGCAACG CTACGACGGC CAGGCCATCG CCGACCGCAT GCGCAACGAC TACCTGGTCG TGCTCGGCGC ACGACACGAC TGGCGCAACT TCGACCAGCA ATACGCGCGC TTCGTGCTGA ACGACGACAC CCAGGTGAAG TGCTACGCGC TCGAATCGCG CGCGGCGAAA GGCGAGAACG TCGTCGACGC AGCGCGCGCG CTGCTCGTCG AGCCGCGCTA TTACGGCGAC GGCTGCGTCG ATCTCATCAC CTCGCTGGCG ATCAGCCAGC AGTTCACGAC CGACGACGTA TGGCAGCAGA TCCGTCTCGC GTACGAACAG AACCAGACCA GCACGGGCGC GAAGCTCGTC GACGCACTGG GCAACAACCG TCCCGATCCG ACGCTGTTCG ATCAGGCCGC AACTACGCCG CCGTTGCTGC TCGCGCGCGG TGTCGGCGCC GATCCGCAAT CGCATCAGCT CGCGCTGCTC GCGATCACGC GCATGGCCCG CAACGATCCC GCCATGGCAG CCGCCACCTT CGGCTCGGTC GCACCTTCGC TGACGTCGCC CGAACGCGGG ATCGGCTGGG GCACGATTGC GTATCAGGCC GCTGCGAAGC AGATGCCGGG CGCCGTCGAC TGGTATCGCC TGTCGGCGAA TGCACCGCTG TCCACGCCCG CTTACGAATG GCGCACGCGC GTCGCGCTTC TTGCCGGCGA CTGGACGATG GTGCGCTGGT CGATCGAGCA AATGCCGCCT TCATTGCGCA GCCAGCCCGC GTGGGCCTAC TGGCACGCGC GCGCTATCAA GGCGGCGGGC GACGTGACGA CGGCCAATCA GGAATTCGAG TCGATCGCGC AGCAGTACAA CTTCTACGGC CAGCTTGCCG CCGAAGAACT CGGCCAGAAG ATCGTCGTGC CGCCGAAAAC CACCGTCACC GATGCCGAAG TGCAACAGGC GGGCGACACG CCCGGCTTCG CGCTTGCCCA GAAGTTCTAT CAGCTGAATC TGCGGCTCGA AGGCAACCGC GAATGGAACT GGCCGTTGCG CAGCATGACC GACCGTCAAC TGATCGCCGC CGCCGAATAT GCGCGCCGTA TCGAGCTCTA TGACCGCGCA GTGAATACGG CCGATCGCAC GAAGACCGAG CACGACTTCT CGCTGCGCTT CCTGTCGCCG TTCCGCGATA TCGTCGAGCG CGACGCGCAG TCGAACGGGC TCGATGTCGA ATGGGCGTAT GGTCTGATCC GTCAGGAATC GCGCTTCATC ATGAACGCGC GCTCGGAGGT CGGCGCGAGC GGCCTGATGC AGCTGATGCC GGGCACGGCG CAACTGGTCG CGAAGAAGAT CGGCCTCGGC ACCATCTCGC GTGCCCAGAT GAACGACATC AACACCAATA TCCTGCTCGG CACGAACTAT CTGTCGATGA TCTACAATGA GTTCGACGGC TCCGCCGTGC TCGCCACGGC GGGCTACAAC GCAGGTCCGG GCCGTCCGCG CAACTGGCGC GCGTCGTTGC CGCGCGGTGT CGAAGGCGCG ATTTTCGCGG AAGCGATTCC GTTCCAGGAA ACGCGCGACT ACGTGAAGAA CGTGCTGTCC AACACCGTCT ACTATGCGGC GTTGTTCGAA GGCCGTCCGC AATCGCTGAA GGCGCGTCTG GGTTATATCC AGCCGTTGCA GTAA
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Protein sequence | MSKRLFRVYR AASLALAAAA LVACSTASAV KPIQLSQLTN DDQIFVQLRE AARNNDAGRA AQLAAMIPDY PAPAYLEYFQ LKPQLFDGSG HPRIDAADAP VLSFLQRYDG QAIADRMRND YLVVLGARHD WRNFDQQYAR FVLNDDTQVK CYALESRAAK GENVVDAARA LLVEPRYYGD GCVDLITSLA ISQQFTTDDV WQQIRLAYEQ NQTSTGAKLV DALGNNRPDP TLFDQAATTP PLLLARGVGA DPQSHQLALL AITRMARNDP AMAAATFGSV APSLTSPERG IGWGTIAYQA AAKQMPGAVD WYRLSANAPL STPAYEWRTR VALLAGDWTM VRWSIEQMPP SLRSQPAWAY WHARAIKAAG DVTTANQEFE SIAQQYNFYG QLAAEELGQK IVVPPKTTVT DAEVQQAGDT PGFALAQKFY QLNLRLEGNR EWNWPLRSMT DRQLIAAAEY ARRIELYDRA VNTADRTKTE HDFSLRFLSP FRDIVERDAQ SNGLDVEWAY GLIRQESRFI MNARSEVGAS GLMQLMPGTA QLVAKKIGLG TISRAQMNDI NTNILLGTNY LSMIYNEFDG SAVLATAGYN AGPGRPRNWR ASLPRGVEGA IFAEAIPFQE TRDYVKNVLS NTVYYAALFE GRPQSLKARL GYIQPLQ
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