Gene Bphy_2883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_2883 
Symbol 
ID6244366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp3236467 
End bp3237642 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content68% 
IMG OID642594688 
Productmajor facilitator transporter 
Protein accessionYP_001859101 
Protein GI186477631 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000788215 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCAGCG CGATCGCGCT CGGGCTCGCG CGCTTTTCCT ATGCATTGCT GCTGCCGCCG 
ATGAAAATCG ACCTCGGCTG GAGCTTCGCG CAATCGGGGG CGATGAACAC GGCGAACGCG
CTCGGCTATC TGCTCGGCGC GCTCGCGTTC ACGCGCATGT CGCGCCGCTG GTCGGCGGGC
GTGCTGTGCG TGGCGGGATG CATCGCAACC GCGTTGCTGA TGGCGATCAC GGGGATGCTG
ACCGATACGA ACGCGCTGTT GGCGCAGCGC GTCGCCACGG GCATCGCGAG CGCCTTCGTT
TTCGTGAGCG GCGGCGTGCT GGCAGCGCGG CTCGCGACAG CGCATCCGCG CGACGCGGGG
CTGGTGCTCG GTCTGTACTA CGGCGGCACG GGGTGGGGCA TCGTCGCATC GGCGCTGCTC
GTGCCGCTGG CGCTCGCTTC GTTTTCGTCG CTGCATCGCG CGCATGTCTG GCAGCTTGCG
TGGTTCGCGC TCGCGGCGGC GTGCGTCGCG TTCTCTTTGC TCGCGGGGCG CGCGGCGCGG
CGTATCGACA GGCAGCACGT GCTGCGCACG GAGACGACGA GCGTTGCGTC GGCGGCCGGG
CGCGCGCCCG CGACGATGCG TTATGCGTTC GCGCTTGCCG GTTACGGGTT GTTCGGCGTC
GGCTACATCG GCTACATGAC GTTCATCGTC GCGCTGCTGC GCAACGGCGG CATGAGCGCA
GGCGTCGTCA CGGGCTTTTA TGTGCTGCTG GGCGTCGCAA CGATCGTGTC GGCGCGCATC
TGGTCGAGGC TGCTCGATCG CACGCGCGGC GGCCAGGCGC TCGCATTGCT CAATGCGTTG
CTCGCGCTTG CGACGCTGAT GCCCGCAATC GTTGCGCATC CCGTCGTTGC GTTTGCGTCG
GGCTTGTTGT TCGGCGCGAC GTTCCTGTCG GCCGTTGCTT CGACGACGGC TTTCGTGCGT
CACAATCTGC CCGCCGCGCA CTGGGGCCGC GGCATCAGCG CATTCACGAT CGTGTTTGCG
TTCGGACAGA TCGTCGGGCC AACCGTGATC GGCTGGGTGT CGGACGGCGT GGGCCTCGAG
CGCGGCCTGG TTTATTCCGC ATGCGTGCTC GCGGCAGGCG CGGTGCTTGC TGGACTACAG
AAAGCATTGA CCCGACGCGC CCCTTCGGTG AACTGA
 
Protein sequence
MGSAIALGLA RFSYALLLPP MKIDLGWSFA QSGAMNTANA LGYLLGALAF TRMSRRWSAG 
VLCVAGCIAT ALLMAITGML TDTNALLAQR VATGIASAFV FVSGGVLAAR LATAHPRDAG
LVLGLYYGGT GWGIVASALL VPLALASFSS LHRAHVWQLA WFALAAACVA FSLLAGRAAR
RIDRQHVLRT ETTSVASAAG RAPATMRYAF ALAGYGLFGV GYIGYMTFIV ALLRNGGMSA
GVVTGFYVLL GVATIVSARI WSRLLDRTRG GQALALLNAL LALATLMPAI VAHPVVAFAS
GLLFGATFLS AVASTTAFVR HNLPAAHWGR GISAFTIVFA FGQIVGPTVI GWVSDGVGLE
RGLVYSACVL AAGAVLAGLQ KALTRRAPSV N