Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_2883 |
Symbol | |
ID | 6244366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | - |
Start bp | 3236467 |
End bp | 3237642 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642594688 |
Product | major facilitator transporter |
Protein accession | YP_001859101 |
Protein GI | 186477631 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00000000788215 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGCAGCG CGATCGCGCT CGGGCTCGCG CGCTTTTCCT ATGCATTGCT GCTGCCGCCG ATGAAAATCG ACCTCGGCTG GAGCTTCGCG CAATCGGGGG CGATGAACAC GGCGAACGCG CTCGGCTATC TGCTCGGCGC GCTCGCGTTC ACGCGCATGT CGCGCCGCTG GTCGGCGGGC GTGCTGTGCG TGGCGGGATG CATCGCAACC GCGTTGCTGA TGGCGATCAC GGGGATGCTG ACCGATACGA ACGCGCTGTT GGCGCAGCGC GTCGCCACGG GCATCGCGAG CGCCTTCGTT TTCGTGAGCG GCGGCGTGCT GGCAGCGCGG CTCGCGACAG CGCATCCGCG CGACGCGGGG CTGGTGCTCG GTCTGTACTA CGGCGGCACG GGGTGGGGCA TCGTCGCATC GGCGCTGCTC GTGCCGCTGG CGCTCGCTTC GTTTTCGTCG CTGCATCGCG CGCATGTCTG GCAGCTTGCG TGGTTCGCGC TCGCGGCGGC GTGCGTCGCG TTCTCTTTGC TCGCGGGGCG CGCGGCGCGG CGTATCGACA GGCAGCACGT GCTGCGCACG GAGACGACGA GCGTTGCGTC GGCGGCCGGG CGCGCGCCCG CGACGATGCG TTATGCGTTC GCGCTTGCCG GTTACGGGTT GTTCGGCGTC GGCTACATCG GCTACATGAC GTTCATCGTC GCGCTGCTGC GCAACGGCGG CATGAGCGCA GGCGTCGTCA CGGGCTTTTA TGTGCTGCTG GGCGTCGCAA CGATCGTGTC GGCGCGCATC TGGTCGAGGC TGCTCGATCG CACGCGCGGC GGCCAGGCGC TCGCATTGCT CAATGCGTTG CTCGCGCTTG CGACGCTGAT GCCCGCAATC GTTGCGCATC CCGTCGTTGC GTTTGCGTCG GGCTTGTTGT TCGGCGCGAC GTTCCTGTCG GCCGTTGCTT CGACGACGGC TTTCGTGCGT CACAATCTGC CCGCCGCGCA CTGGGGCCGC GGCATCAGCG CATTCACGAT CGTGTTTGCG TTCGGACAGA TCGTCGGGCC AACCGTGATC GGCTGGGTGT CGGACGGCGT GGGCCTCGAG CGCGGCCTGG TTTATTCCGC ATGCGTGCTC GCGGCAGGCG CGGTGCTTGC TGGACTACAG AAAGCATTGA CCCGACGCGC CCCTTCGGTG AACTGA
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Protein sequence | MGSAIALGLA RFSYALLLPP MKIDLGWSFA QSGAMNTANA LGYLLGALAF TRMSRRWSAG VLCVAGCIAT ALLMAITGML TDTNALLAQR VATGIASAFV FVSGGVLAAR LATAHPRDAG LVLGLYYGGT GWGIVASALL VPLALASFSS LHRAHVWQLA WFALAAACVA FSLLAGRAAR RIDRQHVLRT ETTSVASAAG RAPATMRYAF ALAGYGLFGV GYIGYMTFIV ALLRNGGMSA GVVTGFYVLL GVATIVSARI WSRLLDRTRG GQALALLNAL LALATLMPAI VAHPVVAFAS GLLFGATFLS AVASTTAFVR HNLPAAHWGR GISAFTIVFA FGQIVGPTVI GWVSDGVGLE RGLVYSACVL AAGAVLAGLQ KALTRRAPSV N
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