| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2814 |
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| Symbol | rpsD |
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| ID | 6244297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 3168414 |
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| End bp | 3169037 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642594610 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_001859032 |
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| Protein GI | 186477562 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0136866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.264944 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCACGCT ATATCGGCCC TAAAGCCAAG CTGTCTCGCC GTGAAGGCAC CGATCTCTTC
CTGAAGAGCG CACGTCGTTC GCTCGCTGAC AAGTGCAAGC TTGACAGCAA GCCGGGTCAA
CATGGCCGCA CCTCGGGCGC TCGTACGTCC GACTACGGCA CGCAGCTGCG CGAAAAGCAA
AAAGTGAAGC GCATTTACGG CGTGCTCGAA CGCCAGTTCC GCCGTTACTT CGCTGAAGCA
GATCGCCGCA AGGGCAACAC GGGCGAAAAC CTGTTGAAGC TGCTCGAATC GCGTCTCGAC
AACGTCGTCT ACCGCATGGG CTTCGGCTCG ACGCGCGCTG AAGCACGCCA GCTCGTGAGC
CACAAGGCAA TCACGGTGAA CGGCGTTGTG GCAAACATCC CGTCGCTCCA AGTGAAGGCT
GGCGATGTGA TTGCCGTGCG CGAACAGGCG AAGAAGCAGG CTCGTATTCT CGAGGCGCTG
TCGCTCGCCG AACAAGGCGG TCTGCCGCAG TGGGTTGCTG TCGATTCGAA GAAGTTCGAA
GGCACGTTCA AGTCGATGCC GGAACGCAGC GATATCGCTG GCGACATCAA CGAAAGCCTG
ATCGTCGAAT TGTATTCGCG CTAA
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| Protein sequence | MARYIGPKAK LSRREGTDLF LKSARRSLAD KCKLDSKPGQ HGRTSGARTS DYGTQLREKQ
KVKRIYGVLE RQFRRYFAEA DRRKGNTGEN LLKLLESRLD NVVYRMGFGS TRAEARQLVS
HKAITVNGVV ANIPSLQVKA GDVIAVREQA KKQARILEAL SLAEQGGLPQ WVAVDSKKFE
GTFKSMPERS DIAGDINESL IVELYSR
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