Gene Bphy_2729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_2729 
Symbol 
ID6244212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp3084759 
End bp3086228 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content65% 
IMG OID642594524 
Productmajor facilitator transporter 
Protein accessionYP_001858947 
Protein GI186477477 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.876432 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGAAC CCTCTACTGC CACGGTCGGC GCCGAGCCGT CCGTCACCGT CGAGACCGAT 
CTGCCATCGC GCCTCGATCG CTTGCCTTGG GGCCGCTTCC ACTCGCTGAT CGTGGTTGCG
CTCGGCGTGA CATGGCTGCT CGACGGGCTG GAAGTGACGC TCGCGGGATC CGTCGCAAGC
GCCTTGAAGT CGAGCGACGT GCTGCACTTT TCGAACGCGG ACGTGGGGCT CGCGGGCAGC
GCATATATCG CGGGCGCGGT GCTAGGCGCG CTCGGCTTCG GCTGGCTGAC CGACCGGCTC
GGACGCCGCA AGCTGTTCTT CATTACGCTC GCGCTCTATC TGGCGGCGAC GGCGGCGACG
GCATTCTCGT GGAATCTCGC AAGCTTTCTG TTGTTCCGCT TTTTGACGGG CGCGGGCATC
GGCGGCGAAT ACACCGCAAT CAATTCGACC ATCCAGGAAT TCACGCCCGC CCGCGTGCGT
GGCCACACCG ATCTTGCCAT CAATGGCACC TTCTGGATCG GCGCAGCACT CGGCGCGATC
GGTTCGCTGG TGCTGCTCGA TCCGCATCTG TTCCACGGCG ACTGGGGCTG GCGCGCGTGC
TTCTTCATTG GGGCGGCGCT CGCGCTGGCG ATCCTGCCGA TGCGCGTCTG GATCCCCGAA
AGCCCGCGCT GGCTGCTCAC GCACGGCGAA GAAAAGGAAG CGCGCCGGAT CGTCGAAGGT
ATCGAGGCGC GCTTCCGCGC GCAAGACCAC GCCCTTGCCG ACGACGCGCT CAAGCGTCTG
CGCCTGCGTG CCCGCGAGCG CACGACGTTG CGCGAGGTCT TCCACACGCT GTTCGTGTTG
CATCGGCGCC GCGCGCTGGT CGGGCTGTCG CTGATGACGG CACAGGCGTT CTTCTACAAC
GCGATCTTCT TCACCTACGC GCTCGTCCTG ACGGACTTCT ATCACGTGCC CGGCGACCAC
ATCGGCTGGT ATATCCTGCC GTTCGCGCTC GGGAATTTCG CCGGGCCGCT TTTGATCGGC
AGGCTGTTCG ATGTGATCGG CCGACGCAAG ATGATCGCCG CGACCTACGC AATCTCCGCG
ATCCTGCTGA CCTTGAGCGG CTACCTGTTC GAGCAGGCGT TGCTCACCGT AACGACGCAA
ACGATCGCGT GGATGGTGAT TTTCTTCTTC GCGTCGGCGG CGGCAAGCTC GGCGTATCTA
ACCGTCAGCG AATCGTTTCC GCTCGAAATC CGCGCGCTCG CGATCGCGGT GTTTTACGCG
TTCGGCACGG CGCTGGGCGG TATCGCGGGG CCGGCGTTCT TCGGCCGTCT GATTGACACG
CAGCAGCGCA GCGAAGTGTT CTCCGGCTAT CTGGTCGGCT CGGCGCTGAT GCTGGCCGCG
GCGCTCATCG GGGCGATCTG GGGCGTCGAC GCCGAGCGCC GTTCGCTCGA GACGGTCGCG
GCGCCGTTGT CAGCCGTCGA GGATCAGTAA
 
Protein sequence
MQEPSTATVG AEPSVTVETD LPSRLDRLPW GRFHSLIVVA LGVTWLLDGL EVTLAGSVAS 
ALKSSDVLHF SNADVGLAGS AYIAGAVLGA LGFGWLTDRL GRRKLFFITL ALYLAATAAT
AFSWNLASFL LFRFLTGAGI GGEYTAINST IQEFTPARVR GHTDLAINGT FWIGAALGAI
GSLVLLDPHL FHGDWGWRAC FFIGAALALA ILPMRVWIPE SPRWLLTHGE EKEARRIVEG
IEARFRAQDH ALADDALKRL RLRARERTTL REVFHTLFVL HRRRALVGLS LMTAQAFFYN
AIFFTYALVL TDFYHVPGDH IGWYILPFAL GNFAGPLLIG RLFDVIGRRK MIAATYAISA
ILLTLSGYLF EQALLTVTTQ TIAWMVIFFF ASAAASSAYL TVSESFPLEI RALAIAVFYA
FGTALGGIAG PAFFGRLIDT QQRSEVFSGY LVGSALMLAA ALIGAIWGVD AERRSLETVA
APLSAVEDQ