| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2701 |
|---|
| Symbol | trpC |
|---|
| ID | 6244184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 3054545 |
|---|
| End bp | 3055330 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642594496 |
|---|
| Product | indole-3-glycerol-phosphate synthase |
|---|
| Protein accession | YP_001858919 |
|---|
| Protein GI | 186477449 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATA TTCTCGACCG CATCATCGAC GTCAAGCGCC AAGAAGTGCG CGCCGCGCAG
CAAAGCGCGC CGCTCGAAGA ACTGCGTCTC CAGGCATCCA CACGCGATCT GCGCGATTTC
GTCGGCGCAA TCCGCGCCAA GCACGAGGCC GGTCTCGCGG CCGTGATCGC CGAGGTCAAG
AAGGCGAGCC CGTCGAAAGG CGTGCTGCGC GAGCACTTCG TCCCCGCCGA TATCGCGCGT
TCGTATGCCA ATCATGGCGC AGCATGTCTG TCCGTGCTGA CCGACGTGCA GTTCTTCAAG
GGCAGCGCAC AGTATCTGGA AGAAGCGCGC GCCGCCTGCC AGTTGCCCGT GCTGCGCAAG
GACTTCATCG TCGATCCGTA TCAGATCCTC GAAGCGCGCG CGATGGGCGC CGACGCGATC
CTGCTGATCG TCGCAGCACT CGAAACCTCG CAGATGCAGG ACCTCGAAGC GTACGCGCAC
TCGCTCGGTC TCGCGGTGCT CGTCGAAGTG CACGACAAGG ACGAACTGGT CGAAGCGCTG
ACGCTGAAGA CGCCGCTGAT CGGCGTGAAC AACCGCAATC TGCGCACGTT CGAAACTTCG
ATCGACACGA CGCTCGGCCT GCTCGACATG ATGCCGGACG ACCGCATCGT CGTGACCGAA
TCCGGCATTC TGTCGCGCAC CGACGTCGAG CGGATGCGCG CGATGGACGT GAACACGTTC
CTCGTCGGCG AGGCGTTCAT GCGTGCCGAC GAGCCGGGCG TGGAACTTGC GCGGATGTTC
TTCTGA
|
|---|
| Protein sequence | MSDILDRIID VKRQEVRAAQ QSAPLEELRL QASTRDLRDF VGAIRAKHEA GLAAVIAEVK
KASPSKGVLR EHFVPADIAR SYANHGAACL SVLTDVQFFK GSAQYLEEAR AACQLPVLRK
DFIVDPYQIL EARAMGADAI LLIVAALETS QMQDLEAYAH SLGLAVLVEV HDKDELVEAL
TLKTPLIGVN NRNLRTFETS IDTTLGLLDM MPDDRIVVTE SGILSRTDVE RMRAMDVNTF
LVGEAFMRAD EPGVELARMF F
|
|---|
| |