| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2671 |
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| Symbol | ddl |
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| ID | 6244154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 3012766 |
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| End bp | 3013707 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642594461 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_001858889 |
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| Protein GI | 186477419 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases
[TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGTA TCGATCCTAA ATCTTTCGGC AAGGTTGCCG TGCTGCTCGG CGGTGCGTCC
GCCGAGCGCG AAGTGTCGCT GAACTCCGGC CGTCTCGTGC TGCAAGGCCT GCGCGATGCA
GGCGTCGACG CGTATGCGTT CGATCCCGCC GAGCGTCCGC TCGCGGCATT GAAGGATGAA
GGCTTCGTGC GCGCGTTCAA CGCGCTGCAC GGCGGCTATG GCGAGAACGG CCAGATTCAG
GGCGCGCTCG ATTTCTACGG TATCCGTTAT ACGGGCAGCG GCGTCCTCGG CTCGGCGCTC
GGTCTCGACA AGTTCCGCAC CAAGCTCGTG TGGCAGCAGC TCGGCATTCC GACGCCGCCG
TTCGAAGCCG TGCTGCGCGG CGACGACTAC GCCGCGCGCG CGCAGGGCAT CGTCGCGAAG
CTCGGCTTGC CGCTCTTCGT GAAGCCGGCC AGCGAAGGGT CGAGCGTTGC CGTCATCAAG
GTGAAGACGG CCGACGCGCT CGTGCCCGCG CTCGAAGAAG CGGTGAAGTT CGACAAGATC
GTCGTAGTGG AAAAGAGCAT CGAAGGCGGC GGCGAGTACA CGGCGTGCAT CGCGGGCGAT
CTCGATCTGC CCATCATCCG CATCGTGCCC GCCGGCGAGT TCTACGACTA TCACGCGAAG
TACATCGCGA ACGACACGCA GTACATGATT CCGTGCGGCA TCGCGGCTGA AGAAGAAGCG
CGCCTGAAGA AGCTCGCGCG CCAGGCGTTC GACGTGCTCG GCTGCACCGA CTGGGGTCGT
GCCGACTTCA TGCTGGACGG AGAAGGCAAC GCATATTTTC TCGAAGTGAA CACGGCGCCC
GGCATGACGG ATCATTCGCT GCCGCCGAAG GCAGCGCGTG CTGTCGGCAT CAGCTACCAG
GAACTGGTGG TGAAGGTGCT CGCGCTGACG CTGAAGGATT AA
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| Protein sequence | MSGIDPKSFG KVAVLLGGAS AEREVSLNSG RLVLQGLRDA GVDAYAFDPA ERPLAALKDE
GFVRAFNALH GGYGENGQIQ GALDFYGIRY TGSGVLGSAL GLDKFRTKLV WQQLGIPTPP
FEAVLRGDDY AARAQGIVAK LGLPLFVKPA SEGSSVAVIK VKTADALVPA LEEAVKFDKI
VVVEKSIEGG GEYTACIAGD LDLPIIRIVP AGEFYDYHAK YIANDTQYMI PCGIAAEEEA
RLKKLARQAF DVLGCTDWGR ADFMLDGEGN AYFLEVNTAP GMTDHSLPPK AARAVGISYQ
ELVVKVLALT LKD
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